Alternatives and similar repositories for Toolbox-Romano-et-al:

Users that are interested in Toolbox-Romano-et-al are comparing it to the libraries listed below

• ransona / ROIMatchPub
  Match suite2p ROIs between imaging sessions
  ☆25Updated 5 years ago
• ikinsella / locaNMF
  Pytorch implementation of LocaNMF
  ☆35Updated 5 years ago
• RichieHakim / ROICaT
  Region Of Interest Classification and Tracking
  ☆16Updated this week
• zhoupc / OASIS_matlab
  ☆35Updated 3 years ago
• int-brain-lab / ibllib
  IBL core shared libraries
  ☆62Updated this week
• j-friedrich / OASIS
  Deconvolution of calcium imaging data
  ☆90Updated 2 months ago
• bahanonu / ciatah
  CIAtah (pronounced cheetah): a software package for calcium imaging analysis of one- and two-photon imaging datasets. Documentation: http…
  ☆86Updated 4 months ago
• denisecailab / minian
  miniscope analysis pipeline with interactive visualizations
  ☆92Updated 8 months ago
• MLspike / spikes
  spike extraction from calcium signals (Deneux et al., 2016)
  ☆28Updated 4 years ago
• kushalkolar / MESmerize
  Platform for Calcium Imaging analysis. DEPRECATED.
  ☆60Updated last year
• joao-semedo / communication-subspace
  Code for "Cortical areas interact through a communication subspace", Semedo et al. (Neuron, 2019)
  ☆45Updated 5 years ago
• nelpy / nelpy
  Neuroelectrophysiology object model and data analysis in Python.
  ☆51Updated last week
• inscopix / inscopix-cnmfe
  Algorithm for automated source extraction from 1P data
  ☆21Updated last year
• SjulsonLab / methods_class
  "Approaches to Study Neural Circuits" course
  ☆65Updated 3 months ago
• JaneliaSciComp / JRCLUST
  JRCLUST
  ☆34Updated 10 months ago
• cortex-lab / sortingQuality
  Functions to assess quality of spike sorting results
  ☆32Updated last year
• HelmchenLabSoftware / Cascade
  Calibrated inference of spiking from calcium ΔF/F data using deep networks
  ☆133Updated this week
• MouseLand / pykilosort
  WIP: Python port of Kilosort2
  ☆50Updated last year
• mdhumphries / SpikeTrainCommunitiesToolBox
  MATLAB toolbox for spike-train community detection
  ☆14Updated last year
• petersaj / AP_histology
  Histology processing
  ☆65Updated last week
• zivlab / island
  Revealing neural correlates of behavior without behavioral measurements
  ☆14Updated 5 years ago
• zivlab / CellReg
  Registration of cells across sessions.
  ☆73Updated 7 months ago
• PeyracheLab / Tutorial_HDPlaceCells_Analysis
  A course given at the 2017 Canadian Neuroscience meeting, Neural Signal Analysis Satellite.
  ☆14Updated 6 years ago
• int-brain-lab / iblapps
  pyqt5 dependent applications for IBL sessions
  ☆26Updated last week
• Whitlock-Group / HERBS
  ☆51Updated 6 months ago
• catniplab / NPGLM
  non-parametric inference for convolutional filters in poisson glms
  ☆13Updated 3 years ago
• SpikeInterface / spiketoolkit
  Python-based tools for pre-, post-processing, validating, and curating spike sorting datasets.
  ☆50Updated 3 years ago
• NeurodataWithoutBorders / matnwb
  A Matlab interface for reading and writing NWB files
  ☆51Updated this week
• PeyracheLab / miniscoPy
  A package to analyse calcium imaging data recorded with the Miniscope.
  ☆32Updated 2 years ago
• PeyracheLab / pynacollada
  pynapple collaborative data analysis (high level python scripts)
  ☆37Updated 11 months ago