zebrain-lab / Toolbox-Romano-et-al
Computational toolbox for analysis of calcium imaging data of neuronal populations
☆32Updated last year
Alternatives and similar repositories for Toolbox-Romano-et-al
Users that are interested in Toolbox-Romano-et-al are comparing it to the libraries listed below
Sorting:
- ☆36Updated 3 years ago
- Deconvolution of calcium imaging data☆93Updated 3 months ago
- spike extraction from calcium signals (Deneux et al., 2016)☆29Updated 5 years ago
- CIAtah (pronounced cheetah): a software package for calcium imaging analysis of one- and two-photon imaging datasets. Documentation: http…☆87Updated 6 months ago
- Match suite2p ROIs between imaging sessions☆25Updated 6 years ago
- Functions to assess quality of spike sorting results☆33Updated last year
- Neuroelectrophysiology object model and data analysis in Python.☆51Updated 2 months ago
- Pytorch implementation of LocaNMF☆35Updated 5 years ago
- miniscope analysis pipeline with interactive visualizations☆93Updated 9 months ago
- Platform for Calcium Imaging analysis. DEPRECATED.☆60Updated last year
- A table containing imaging analysis tools for biology, with a focus on calcium imaging.☆49Updated last year
- IBL core shared libraries☆63Updated this week
- Blazing fast calcium imaging analysis toolbox☆22Updated 7 years ago
- Registration of cells across sessions.☆75Updated 8 months ago
- Code for "Cortical areas interact through a communication subspace", Semedo et al. (Neuron, 2019)☆46Updated 5 years ago
- Histology processing☆64Updated 3 weeks ago
- WIP: Python port of Kilosort2☆51Updated last year
- Code accompanying Steinmetz et al., 2019☆59Updated 3 years ago
- Compression, denoising and demixing of functional imaging recordings☆28Updated 6 years ago
- pyqt5 dependent applications for IBL sessions☆26Updated last month
- ☆51Updated 8 months ago
- Region Of Interest Classification and Tracking☆18Updated this week
- Fitting and simulation of Poisson generalized linear model for single and multi-neuron spike trains (Pillow et al 2008).☆39Updated 5 years ago
- MATLAB toolbox for spike-train community detection☆15Updated last year
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆73Updated last month
- A package to analyse calcium imaging data recorded with the Miniscope.☆32Updated 3 years ago
- pynapple collaborative data analysis (high level python scripts)☆37Updated last year
- Single photon tools for Neuroscience☆35Updated last year
- An event-based tool for analyzing and quantifying calcium or neurotransmitter imaging data☆53Updated last year
- Python-based tools for pre-, post-processing, validating, and curating spike sorting datasets.☆50Updated 3 years ago