☆221Jun 3, 2024Updated last year
Alternatives and similar repositories for deepinterpolation
Users that are interested in deepinterpolation are comparing it to the libraries listed below
Sorting:
- ☆34May 19, 2025Updated 9 months ago
- a visualization method for neural data☆241Apr 4, 2025Updated 10 months ago
- Computational toolbox for large scale Calcium Imaging Analysis, including movie handling, motion correction, source extraction, spike dec…☆717Feb 19, 2026Updated last week
- ☆29Oct 22, 2025Updated 4 months ago
- A GUI built on brainrender: visualise brain regions, neurons and labelled cells.☆12Nov 26, 2020Updated 5 years ago
- DeepCAD: Deep self-supervised learning for calcium imaging denoising☆121Aug 3, 2023Updated 2 years ago
- DeepCAD-RT: Real-time denoising of fluorescence time-lapse imaging using deep self-supervised learning☆127May 28, 2025Updated 9 months ago
- Framework for predicting neural activity from mouse orofacial movements tracked using a pose estimation model. Package also includes sing…☆185Jan 26, 2026Updated last month
- Functions to assess quality of spike sorting results☆34Sep 6, 2023Updated 2 years ago
- Calibrated inference of spiking from calcium ΔF/F data using deep networks☆159Feb 11, 2026Updated 2 weeks ago
- Matlab routines for online non-rigid motion correction of calcium imaging data☆153May 29, 2022Updated 3 years ago
- Python-based module for extracting from, converting between, and handling optical imaging data from several file formats. Inspired by Spi…☆16Feb 16, 2026Updated last week
- ☆12Feb 27, 2023Updated 3 years ago
- Modules for processing extracellular electrophysiology data from Neuropixels probes☆123Aug 18, 2024Updated last year
- Multichannel time series lossless compression in pure Python based on NumPy and zlib☆45Mar 18, 2025Updated 11 months ago
- Calcium Data Extraction and Analysis☆49Dec 5, 2022Updated 3 years ago
- WIP: Python port of Kilosort2☆50Jul 8, 2023Updated 2 years ago
- analysis tools for large-scale neural recordings☆16Apr 4, 2025Updated 10 months ago
- cell detection in calcium imaging recordings☆430Updated this week
- CIAtah (pronounced cheetah): a software package for calcium imaging analysis of one- and two-photon imaging datasets. Documentation: http…☆99Nov 14, 2024Updated last year
- Variational Animal Motion Embedding - A tool for time series embedding and clustering☆199Oct 3, 2024Updated last year
- Compression, denoising and demixing of functional imaging recordings☆28Jul 11, 2018Updated 7 years ago
- An implementation of piecewise linear time warping for multi-dimensional time series alignment☆188Aug 15, 2024Updated last year
- PYthon Neural Analysis Package☆355Updated this week
- A plugin for open-ephys enabling the insertion of Cython into the open-ephys signal chain.☆11Dec 22, 2021Updated 4 years ago
- Software for the paper "Fast and robust active neuron segmentation in two-photon calcium imaging using spatio-temporal deep learning," Pr…☆67Sep 12, 2019Updated 6 years ago
- Match suite2p ROIs between imaging sessions☆28Apr 12, 2019Updated 6 years ago
- Fast spike sorting with drift correction☆591Jan 28, 2026Updated 3 weeks ago
- GUI to compute and explore receptive fields, primarily from calcium imaging recordings☆13Jun 26, 2021Updated 4 years ago
- Demo code for CAPTURE and DANNCE☆29Jul 7, 2021Updated 4 years ago
- Tools for processing 2P recordings☆132Oct 9, 2023Updated 2 years ago
- A Python-based module for creating flexible and robust spike sorting pipelines.☆730Updated this week
- A gui for browsing joint calcium imaging + behavioral data.☆55Jan 22, 2025Updated last year
- EXTRACT is a tractable and robust automated cell extraction tool for calcium imaging, which extracts the activities of cells as time seri…☆84Feb 16, 2026Updated last week
- Denoising and Demixing Pipeline for in vivo Voltage Imaging Data (SGPMD-NMF)☆15Apr 24, 2023Updated 2 years ago
- OpenScope databook: a collaborative, versioned, data-centric collection of foundational analyses for reproducible systems neuroscience 🐁…☆75Feb 13, 2026Updated 2 weeks ago
- A python package that includes many methods for decoding neural activity☆468Jul 3, 2023Updated 2 years ago
- miniscope analysis pipeline with interactive visualizations☆98Jul 19, 2024Updated last year
- Image processing pipeline to correct motion artifacts and complex image distortions in neuronal calcium imaging data.☆26Dec 21, 2023Updated 2 years ago