Alternatives and similar repositories for Pyper

Users that are interested in Pyper are comparing it to the libraries listed below

• DeshmukhLab / PicameraPaper
  Saxena et al., 2018. Inexpensive, scalable camera system for tracking rats in large spaces
  ☆14Updated 6 years ago
• zhoupc / OASIS_matlab
  ☆36Updated 3 years ago
• portugueslab / stytra
  A modular package to control stimulation and track behaviour
  ☆44Updated 6 months ago
• ransona / ROIMatchPub
  Match suite2p ROIs between imaging sessions
  ☆25Updated 6 years ago
• zebrain-lab / Toolbox-Romano-et-al
  Computational toolbox for analysis of calcium imaging data of neuronal populations
  ☆33Updated last year
• kristinbranson / JAABA
  Janelia Animal Behavior Detector
  ☆83Updated last month
• Whitlock-Group / HERBS
  ☆51Updated 9 months ago
• gordonberman / MotionMapper
  Sample implementation of the MotionMapper behavioral analysis algorithms
  ☆79Updated 4 years ago
• DeNardoLab / BehaviorDEPOT
  Repository for BehaviorDEPOT pipeline app files and source code
  ☆38Updated 8 months ago
• NTCColumbia / moco
  motion correction
  ☆17Updated 2 years ago
• jessedmarshall / CAPTURE_demo
  Demo code for CAPTURE and DANNCE
  ☆29Updated 3 years ago
• VirtualBrainLab / Pinpoint
  Multi-probe trajectory planning in an intuitive 3D environment
  ☆54Updated last month
• katemartian / Photometry_data_processing
  ☆26Updated last year
• kristinbranson / APT
  Animal Part Tracker
  ☆81Updated this week
• agordonfennell / OHRBETS
  An open-source ecosystem of hardware and software for head-fixed behavior
  ☆11Updated last month
• YttriLab / A-SOID
  An active learning platform for expert-guided, data efficient discovery of behavior.
  ☆59Updated last month
• nel-lab / FIOLA
  ☆34Updated 2 weeks ago
• denisecailab / minian
  miniscope analysis pipeline with interactive visualizations
  ☆93Updated 10 months ago
• owenrandlett / Z-Brain
  Z-Brain Viewer and Analysis Scripts for MAP-Mapping
  ☆22Updated last month
• PolarBean / DLC_ROI_tool
  A tool for drawing ROIs on videos and analysing deeplabcut videos.
  ☆33Updated 4 years ago
• BIOP / ijp-imagetoatlas
  ABBA - Aligning Big Brains and Atlases (2D sections to 3D atlas registration)
  ☆49Updated 3 months ago
• SchwarzNeuroconLab / DeepLabStream
  Closed-loop behavioral experiment toolkit using pose estimation of body parts.
  ☆55Updated last year
• brainglobe / brainglobe-segmentation
  Segmentation of anatomical structures in a common coordinate space
  ☆33Updated this week
• adamshch / SEUDO
  ☆8Updated 3 years ago
• yu-lab-vt / AQuA
  An event-based tool for analyzing and quantifying calcium or neurotransmitter imaging data
  ☆53Updated last year
• talialerner / Photometry-Analysis-Shared
  ☆11Updated 8 years ago
• GoodhillLab / neural-assembly-detection
  Code published with the paper J. Mölter, L. Avitan, and G. J. Goodhill. "Detecting neural assemblies in calcium imaging data". BMC Biolog…
  ☆12Updated 6 years ago
• cortex-lab / sortingQuality
  Functions to assess quality of spike sorting results
  ☆33Updated last year
• bermanlabemory / motionmapperpy
  Modified Python 3.0 implementation of MotionMapper (https://github.com/gordonberman/MotionMapper)
  ☆29Updated last year
• lahammond / BrainJ
  Fiji pipeline for automated serial section reconstruction and mouse brain analysis.
  ☆29Updated last year