SainsburyWellcomeCentre / Pyper
Motion Tracking
☆13Updated 2 years ago
Alternatives and similar repositories for Pyper:
Users that are interested in Pyper are comparing it to the libraries listed below
- Match suite2p ROIs between imaging sessions☆24Updated 5 years ago
- motion correction☆16Updated 2 years ago
- Janelia Animal Behavior Detector☆78Updated 3 weeks ago
- ☆35Updated 3 years ago
- An event-based tool for analyzing and quantifying calcium or neurotransmitter imaging data☆53Updated 9 months ago
- A modular package to control stimulation and track behaviour☆44Updated 4 months ago
- A GUI and library for doing multi-fiber photometry☆18Updated 7 years ago
- miniscope analysis pipeline with interactive visualizations☆92Updated 7 months ago
- ☆26Updated last year
- Free, platform independent, behavior tracking software.☆127Updated 8 months ago
- Extract regions of interest based on correlated pixel intensity☆24Updated 7 years ago
- EXTRACT is a tractable and robust automated cell extraction tool for calcium imaging, which extracts the activities of cells as time seri…☆71Updated 2 months ago
- Tools to register histological section images and cell count locations to mouse brain atlas☆25Updated 2 years ago
- Code published with the paper J. Mölter, L. Avitan, and G. J. Goodhill. "Detecting neural assemblies in calcium imaging data". BMC Biolog…☆12Updated 5 years ago
- CIAtah (pronounced cheetah): a software package for calcium imaging analysis of one- and two-photon imaging datasets. Documentation: http…☆86Updated 3 months ago
- spike extraction from calcium signals (Deneux et al., 2016)☆28Updated 4 years ago
- SpikeGLX recording system GUI [Neuropixels NI]☆85Updated last week
- Functions to assess quality of spike sorting results☆32Updated last year
- CellExplorer is a graphical user interface, a standardized processing module and data structure for exploring and classifying single cell…☆97Updated 3 months ago
- ☆52Updated 6 months ago
- Fiber photometry data preprocessing - denoising, photobleaching and motion correction.☆25Updated last year
- Single photon tools for Neuroscience☆35Updated last year
- Modified Python 3.0 implementation of MotionMapper (https://github.com/gordonberman/MotionMapper)☆28Updated 9 months ago
- Fiber Photometry Modular Analysis Tool Suite☆36Updated 3 years ago
- Platform for Calcium Imaging analysis. DEPRECATED.☆60Updated last year
- A MINiscope 1-photon-based Calcium Imaging Signal Extraction PIPEline.☆59Updated 8 months ago
- Image processing pipeline to correct motion artifacts and complex image distortions in neuronal calcium imaging data.☆25Updated last year
- A table containing imaging analysis tools for biology, with a focus on calcium imaging.☆47Updated last year
- Sample implementation of the MotionMapper behavioral analysis algorithms☆76Updated 4 years ago
- A head-mounted camera system integrates detailed behavioral monitoring with multichannel electrophysiology in freely moving mice☆27Updated 3 years ago