SainsburyWellcomeCentre / Pyper

Related projects: ⓘ

• DeshmukhLab / PicameraPaper
  Saxena et al., 2018. Inexpensive, scalable camera system for tracking rats in large spaces
  ☆14Updated 6 years ago
• kristinbranson / JAABA
  Janelia Animal Behavior Detector
  ☆76Updated 2 months ago
• portugueslab / stytra
  A modular package to control stimulation and track behaviour
  ☆42Updated this week
• ransona / ROIMatchPub
  Match suite2p ROIs between imaging sessions
  ☆21Updated 5 years ago
• zhoupc / OASIS_matlab
  ☆32Updated 2 years ago
• NTCColumbia / moco
  motion correction
  ☆16Updated last year
• gordonberman / MotionMapper
  Sample implementation of the MotionMapper behavioral analysis algorithms
  ☆76Updated 4 years ago
• yu-lab-vt / AQuA
  An event-based tool for analyzing and quantifying calcium or neurotransmitter imaging data
  ☆50Updated 4 months ago
• kushalkolar / MESmerize
  Platform for Calcium Imaging analysis. DEPRECATED.
  ☆58Updated 9 months ago
• arnefmeyer / mousecam
  A head-mounted camera system integrates detailed behavioral monitoring with multichannel electrophysiology in freely moving mice
  ☆25Updated 3 years ago
• bahanonu / ciatah
  CIAtah (pronounced cheetah): a software package for calcium imaging analysis of one- and two-photon imaging datasets. Documentation: http…
  ☆80Updated last month
• cortex-lab / widefield
  Image processing and tools for widefield imaging
  ☆18Updated 4 years ago
• SchwarzNeuroconLab / DeepLabStream
  Closed-loop behavioral experiment toolkit using pose estimation of body parts.
  ☆52Updated last year
• Whitlock-Group / HERBS
  ☆51Updated 3 weeks ago
• nel-lab / FIOLA
  ☆29Updated 11 months ago
• cortex-lab / sortingQuality
  Functions to assess quality of spike sorting results
  ☆30Updated last year
• schnitzer-lab / EXTRACT-public
  EXTRACT is a tractable and robust automated cell extraction tool for calcium imaging, which extracts the activities of cells as time seri…
  ☆61Updated 3 weeks ago
• denisecailab / ezTrack
  Free, platform independent, behavior tracking software.
  ☆118Updated 2 months ago
• de-Bivort-Lab / margo
  High-throughput real-time tracker for delivery of stimuli and measurement of animal behavior.
  ☆24Updated 7 months ago
• gardner-lab / FinchScope
  Single photon tools for Neuroscience
  ☆35Updated 8 months ago
• EricThomson / CCN_caiman_mesmerize_workshop_2023
  Repo for CCN workshop on caiman and mesmerize in January 2023
  ☆12Updated last year
• denisecailab / minian
  miniscope analysis pipeline with interactive visualizations
  ☆91Updated 2 months ago
• katemartian / Photometry_data_processing
  ☆24Updated last year
• kristinbranson / APT
  Animal Part Tracker
  ☆72Updated last week
• petersaj / neuropixels_trajectory_explorer
  Neuropixels trajectory explorer with the Allen CCF mouse atlas
  ☆65Updated this week
• petersenpeter / CellExplorer
  CellExplorer is a graphical user interface, a standardized processing module and data structure for exploring and classifying single cell…
  ☆96Updated 3 weeks ago
• ryhattori / PatchWarp
  Image processing pipeline to correct motion artifacts and complex image distortions in neuronal calcium imaging data.
  ☆24Updated 8 months ago
• billkarsh / SpikeGLX
  SpikeGLX recording system GUI [Neuropixels NI]
  ☆79Updated this week
• flatironinstitute / neurosift
  Browser-based NWB visualization and DANDI exploration
  ☆42Updated this week
• open-ephys / Bonsai.Miniscope
  Bonsai package for controlling headborne, calcium imaging miniscopes
  ☆12Updated 6 months ago