HarveyLab / mouseVR
Harvey Lab miniaturized mouse VR rig hardware for virtual navigation and decision-making tasks
☆40Updated 3 months ago
Related projects ⓘ
Alternatives and complementary repositories for mouseVR
- miniscope analysis pipeline with interactive visualizations☆91Updated 4 months ago
- CellExplorer is a graphical user interface, a standardized processing module and data structure for exploring and classifying single cell…☆96Updated 3 weeks ago
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆69Updated 2 months ago
- NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…☆113Updated last month
- Match suite2p ROIs between imaging sessions☆23Updated 5 years ago
- Closed-loop behavioral experiment toolkit using pose estimation of body parts.☆52Updated last year
- EXTRACT is a tractable and robust automated cell extraction tool for calcium imaging, which extracts the activities of cells as time seri…☆65Updated 2 weeks ago
- Multi-probe trajectory planning in an intuitive 3D environment☆49Updated last month
- WIP: Python port of Kilosort2☆50Updated last year
- Utilities for managing Neuropixel datasets and Kilosort results☆45Updated last year
- ☆51Updated 2 months ago
- cortex lab code for electrophysiology☆74Updated 9 months ago
- SpikeGLX recording system GUI [Neuropixels NI]☆83Updated this week
- Code for internal lab sharing - polishing has started but is by no means complete☆119Updated 11 months ago
- Calibrated inference of spiking from calcium ΔF/F data using deep networks☆123Updated 3 weeks ago
- pyqt5 dependent applications for IBL sessions☆25Updated last week
- High level pandas-based API for batch analysis of Calcium Imaging data using CaImAn☆61Updated 3 weeks ago
- pynapple collaborative data analysis (high level python scripts)☆37Updated 7 months ago
- BonVision is an open-source closed-loop visual environment generator developed by the Saleem Lab and Solomon Lab at the UCL Institute of …☆11Updated last year
- Python code implementing the ZETA-test☆25Updated 2 months ago
- Repository for BehaviorDEPOT pipeline app files and source code☆35Updated last month
- Software for streaming and controlling neural and behavioral data from freely behaving animals☆117Updated 9 months ago
- A curated list of awesome Neuropixels resources.☆77Updated this week
- Tools to work with Allen Inst CCF data in matlab☆124Updated 8 months ago
- Repository for 2nd generation Bpod platform (formerly beta branch of Bpod repository)☆29Updated 2 months ago
- Algorithm for automated source extraction from 1P data☆19Updated last year
- A gui for browsing joint calcium imaging + behavioral data.☆50Updated 3 months ago
- A modular package to control stimulation and track behaviour☆44Updated 2 weeks ago
- Files and instructions for manufacturing NP1.0, NP2.0alpha, and NP2.0 Neuropixels chronic recording fixtures.☆14Updated 3 months ago
- A table containing imaging analysis tools for biology, with a focus on calcium imaging.☆45Updated last year