HarveyLab / mouseVR
Harvey Lab miniaturized mouse VR rig hardware for virtual navigation and decision-making tasks
☆41Updated 6 months ago
Alternatives and similar repositories for mouseVR:
Users that are interested in mouseVR are comparing it to the libraries listed below
- NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…☆114Updated 3 weeks ago
- Match suite2p ROIs between imaging sessions☆24Updated 5 years ago
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆73Updated 5 months ago
- Multi-probe trajectory planning in an intuitive 3D environment☆52Updated last week
- miniscope analysis pipeline with interactive visualizations☆93Updated 7 months ago
- EXTRACT is a tractable and robust automated cell extraction tool for calcium imaging, which extracts the activities of cells as time seri…☆70Updated 2 months ago
- WIP: Python port of Kilosort2☆50Updated last year
- pyqt5 dependent applications for IBL sessions☆25Updated last week
- CellExplorer is a graphical user interface, a standardized processing module and data structure for exploring and classifying single cell…☆98Updated 2 months ago
- Platform for Calcium Imaging analysis. DEPRECATED.☆60Updated last year
- A GUI and library for doing multi-fiber photometry☆18Updated 7 years ago
- Modules for processing extracellular electrophysiology data from Neuropixels probes☆112Updated 6 months ago
- Utilities for managing Neuropixel datasets and Kilosort results☆46Updated last year
- CAD files for the Apollo Implant: a device for Chronic Neuropixels Implantation☆21Updated 3 weeks ago
- Code for internal lab sharing - polishing has started but is by no means complete☆125Updated last year
- A table containing imaging analysis tools for biology, with a focus on calcium imaging.☆46Updated last year
- High level pandas-based API for batch analysis of Calcium Imaging data using CaImAn☆64Updated 3 months ago
- Repository for 2nd generation Bpod platform (formerly beta branch of Bpod repository)☆33Updated last month
- Closed-loop behavioral experiment toolkit using pose estimation of body parts.☆52Updated last year
- SpikeGLX recording system GUI [Neuropixels NI]☆84Updated this week
- Algorithm for automated source extraction from 1P data☆21Updated last year
- cortex lab code for electrophysiology☆78Updated last year
- Python code implementing the ZETA-test☆25Updated 5 months ago
- pynapple collaborative data analysis (high level python scripts)☆37Updated 10 months ago
- ☆52Updated 5 months ago
- Calibrated inference of spiking from calcium ΔF/F data using deep networks☆129Updated last week
- Tools to register histological section images and cell count locations to mouse brain atlas☆25Updated 2 years ago
- Configurable acquisition from multiple FLIR/Point Grey camera using Bonsai and Python to h264 compress the video on the GPU.☆13Updated 2 years ago
- "Approaches to Study Neural Circuits" course☆65Updated 2 months ago
- A gui for browsing joint calcium imaging + behavioral data.☆51Updated 3 weeks ago