HarveyLab / mouseVRLinks
Harvey Lab miniaturized mouse VR rig hardware for virtual navigation and decision-making tasks
☆43Updated last year
Alternatives and similar repositories for mouseVR
Users that are interested in mouseVR are comparing it to the libraries listed below
Sorting:
- miniscope analysis pipeline with interactive visualizations☆95Updated last year
- Match suite2p ROIs between imaging sessions☆27Updated 6 years ago
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆76Updated 5 months ago
- NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…☆131Updated 2 months ago
- Registration of cells across sessions.☆75Updated last year
- Tools to work with Allen Inst CCF data in matlab☆140Updated 2 months ago
- SpikeGLX recording system GUI [Neuropixels NI]☆96Updated this week
- Framework for predicting neural activity from mouse orofacial movements tracked using a pose estimation model. Package also includes sing…☆175Updated last month
- Modules for processing extracellular electrophysiology data from Neuropixels probes☆120Updated last year
- CellExplorer is a graphical user interface, a standardized processing module and data structure for exploring and classifying single cell…☆106Updated 9 months ago
- Multi-probe trajectory planning in an intuitive 3D environment☆56Updated this week
- Closed-loop behavioral experiment toolkit using pose estimation of body parts.☆60Updated 2 years ago
- Calibrated inference of spiking from calcium ΔF/F data using deep networks☆151Updated 3 weeks ago
- Code for internal lab sharing - polishing has started but is by no means complete☆129Updated last year
- Platform for Calcium Imaging analysis. DEPRECATED.☆62Updated last year
- WIP: Python port of Kilosort2☆50Updated 2 years ago
- ☆52Updated last year
- Utilities for managing Neuropixel datasets and Kilosort results☆48Updated 4 months ago
- Histology processing☆69Updated last week
- A curated list of awesome Neuropixels resources.☆110Updated last month
- CIAtah (pronounced cheetah): a software package for calcium imaging analysis of one- and two-photon imaging datasets. Documentation: http…☆95Updated 10 months ago
- GPU code for spike sorting☆187Updated last year
- pyqt5 dependent applications for IBL sessions☆29Updated 3 weeks ago
- Repository for 2nd generation Bpod platform (formerly beta branch of Bpod repository)☆38Updated last month
- EXTRACT is a tractable and robust automated cell extraction tool for calcium imaging, which extracts the activities of cells as time seri…☆77Updated 9 months ago
- cortex lab code for electrophysiology☆83Updated last year
- Modules for processing extracellular electrophysiology data from Neuropixels probes☆62Updated 2 months ago
- Configurable acquisition from multiple FLIR/Point Grey camera using Bonsai and Python to h264 compress the video on the GPU.☆15Updated 6 months ago
- Free, platform independent, behavior tracking software.☆139Updated 2 months ago
- A gui for browsing joint calcium imaging + behavioral data.☆54Updated 7 months ago