churchlab / UniRepLinks
UniRep model, usage, and examples.
☆352Updated 3 years ago
Alternatives and similar repositories for UniRep
Users that are interested in UniRep are comparing it to the libraries listed below
Sorting:
- Evolutionary couplings from protein and RNA sequence alignments☆271Updated 3 months ago
- Get protein embeddings from protein sequences☆494Updated 2 years ago
- A generative latent variable model for biological sequence families.☆221Updated 3 years ago
- ☆247Updated 10 months ago
- Source code for "Learning protein sequence embeddings using information from structure" - ICLR 2019☆260Updated 4 years ago
- Reimplementation of the UniRep protein featurization model.☆107Updated 9 months ago
- A collection of *fold* tools☆293Updated 9 months ago
- trRosetta for protein design☆179Updated 4 years ago
- A package to predict protein inter-residue geometries from sequence data☆216Updated 3 years ago
- Fast, accurate antibody structure prediction from deep learning on massive set of natural antibodies☆364Updated last year
- Versatile computational pipeline for processing protein structure data for deep learning applications.☆260Updated last year
- MaSIF- Molecular surface interaction fingerprints. Geometric deep learning to decipher patterns in molecular surfaces.☆658Updated last year
- Efficient evolution from protein language models☆205Updated last year
- Protein hallucination and inpainting with RoseTTAFold☆260Updated 2 years ago
- Deep functional residue identification☆322Updated 2 years ago
- Remote protein homology detection suite.☆573Updated 7 months ago
- RoseTTAFold2 protein/nucleic acid complex prediction☆359Updated last year
- User friendly and accurate binder design pipeline☆564Updated 2 weeks ago
- ☆127Updated 4 years ago
- Tasks Assessing Protein Embeddings (TAPE), a set of five biologically relevant semi-supervised learning tasks spread across different dom…☆702Updated 2 years ago
- Modelling the Language of Life - Deep Learning Protein Sequences☆119Updated 4 years ago
- A machine-learning package for navigating combinatorial protein fitness landscapes.☆125Updated 3 years ago
- ☆193Updated 3 years ago
- BioPhi is an open-source antibody design platform. It features methods for automated antibody humanization (Sapiens), humanness evaluatio…☆195Updated last month
- Jupyter Notebooks for learning the PyRosetta platform for biomolecular structure prediction and design☆577Updated 10 months ago
- P2Rank: Protein-ligand binding site prediction from protein structure based on machine learning.☆329Updated this week
- ☆280Updated this week
- Analysis and figure code from Alley et al. 2019.☆59Updated 2 years ago
- Antibody Numbering and Antigen Receptor ClassIfication☆216Updated last year
- Deep learning models and structure realization scripts for the DeepAb antibody structure prediction method.☆159Updated 2 years ago