chloechsu / combining-evolutionary-and-assay-labelled-dataLinks
☆62Updated 3 years ago
Alternatives and similar repositories for combining-evolutionary-and-assay-labelled-data
Users that are interested in combining-evolutionary-and-assay-labelled-data are comparing it to the libraries listed below
Sorting:
- Public repository describing training and testing of AntiBERTa.☆59Updated 2 years ago
- ☆37Updated last week
- Graphinity: Equivariant Graph Neural Network Architecture for Predicting Change in Antibody-Antigen Binding Affinity☆31Updated last month
- Finetuning ProGen2 protein language model for generation of protein sequences from selected protein families.☆59Updated 4 months ago
- Fitness landscapes for antibodies☆71Updated 4 months ago
- Active Learning-Assisted Directed Evolution for Protein Engineering☆57Updated 6 months ago
- ☆68Updated 4 years ago
- Inference code for PoET: A generative model of protein families as sequences-of-sequences☆72Updated last year
- Zero-shot prediction of mutation effects on protein function with multimodal deep representation learning☆59Updated 11 months ago
- Sequence-Structure-Surface Model for Protein Fitness Prediction (S3F)☆36Updated 6 months ago
- Machine Learning models for in vitro enzyme kinetic parameter prediction☆45Updated last month
- Aligning protein generative models with experimental fitness☆96Updated 3 weeks ago
- Contrastive fitness learning: Reprogramming protein language models for low-N learning of protein fitness landscape☆29Updated 9 months ago
- A dataset for training and benchmarking deep learning models for RNA structure prediction☆56Updated 5 months ago
- TemStaPro - a program for protein thermostability prediction using sequence representations from a protein language model.☆56Updated last year
- HyperMPNN ‒ A general strategy to design thermostable proteins learned from hyperthermophiles☆55Updated 2 weeks ago
- Efficient implementatin of ESM family.☆56Updated 4 months ago
- Antibody-Antigen Docking and Affinity Benchmark☆71Updated 4 years ago
- Antibody-specific masked language model☆55Updated last year
- PLM based active learning model for protein engineering☆80Updated 9 months ago
- AlphaBind code + model accompanying pre-print☆56Updated 5 months ago
- Official code repository for the paper "ProteinNPT: Improving Protein Property Prediction and Design with Non-Parametric Transformers"☆113Updated 2 months ago
- Tool for modelling the CDRs of antibodies☆48Updated 2 years ago
- Data repository for "Fine-tuning protein language models boosts predictions across diverse tasks"☆40Updated 9 months ago
- ☆81Updated 2 months ago
- ☆114Updated 2 years ago
- Convenience Python APIs for antibody numbering using ANARCI☆96Updated 2 weeks ago
- A bunch of shell utilities for dealing the silent files☆61Updated 2 weeks ago
- Code for humanization of antibody and nanobody☆42Updated 6 months ago
- ☆49Updated 2 months ago