chloechsu / combining-evolutionary-and-assay-labelled-dataLinks
☆74Updated 4 years ago
Alternatives and similar repositories for combining-evolutionary-and-assay-labelled-data
Users that are interested in combining-evolutionary-and-assay-labelled-data are comparing it to the libraries listed below
Sorting:
- Fitness landscapes for antibodies☆96Updated this week
- Efficient implementatin of ESM family.☆78Updated 3 months ago
- AlphaBind code + model accompanying pre-print☆87Updated 5 months ago
- A machine-learning package for navigating combinatorial protein fitness landscapes.☆130Updated 4 years ago
- A dataset for training and benchmarking deep learning models for RNA structure prediction☆60Updated 2 weeks ago
- Official code repository for the paper "ProteinNPT: Improving Protein Property Prediction and Design with Non-Parametric Transformers"☆125Updated last month
- Scoring function for interprotein interactions in AlphaFold2 and AlphaFold3☆173Updated 8 months ago
- Active Learning-Assisted Directed Evolution for Protein Engineering☆75Updated 2 months ago
- Zero-shot prediction of mutation effects on protein function with multimodal deep representation learning☆67Updated 4 months ago
- Public repository describing training and testing of AntiBERTa.☆61Updated 2 years ago
- Inference code for PoET: A generative model of protein families as sequences-of-sequences☆86Updated last year
- Protein folding in Pymol☆127Updated last month
- Target Sequence-Conditioned Generation of Peptide Binders via Masked Language Modeling☆107Updated last month
- Graphinity: Equivariant Graph Neural Network Architecture for Predicting Change in Antibody-Antigen Binding Affinity☆56Updated 5 months ago
- ☆93Updated 2 months ago
- Antibody-Antigen Docking and Affinity Benchmark☆75Updated 5 years ago
- ☆73Updated 5 years ago
- HyperMPNN ‒ A general strategy to design thermostable proteins learned from hyperthermophiles☆68Updated 5 months ago
- ☆118Updated last year
- ☆41Updated 3 months ago
- ☆119Updated 6 months ago
- Aligning protein generative models with experimental fitness☆114Updated 2 months ago
- Finetuning ProGen2 protein language model for generation of protein sequences from selected protein families.☆85Updated 10 months ago
- Machine Learning models for in vitro enzyme kinetic parameter prediction☆64Updated 8 months ago
- Python bindings for the TM-align algorithm and code for protein structure comparison developed by Zhang et al.☆61Updated last month
- A compilation of deep learning methods for protein design☆97Updated 3 years ago
- ☆47Updated 11 months ago
- ☆73Updated last year
- Improved antibody structure-based design using inverse folding☆147Updated 2 weeks ago
- Convenience Python APIs for antibody numbering using ANARCI☆111Updated 7 months ago