soedinglab / hh-suiteLinks
Remote protein homology detection suite.
☆608Updated 5 months ago
Alternatives and similar repositories for hh-suite
Users that are interested in hh-suite are comparing it to the libraries listed below
Sorting:
- Foldseek enables fast and sensitive comparisons of large structure sets.☆1,145Updated last week
- AlphaFold2 non-docker setup☆372Updated 2 years ago
- Evolutionary couplings from protein and RNA sequence alignments☆295Updated 2 months ago
- ColabFold on your local PC☆813Updated this week
- MMseqs2: ultra fast and sensitive search and clustering suite☆1,948Updated last month
- Jupyter Notebooks for learning the PyRosetta platform for biomolecular structure prediction and design☆650Updated last year
- UniRep model, usage, and examples.☆359Updated 3 years ago
- ☆300Updated last week
- RoseTTAFold2 protein/nucleic acid complex prediction☆372Updated last year
- Get protein embeddings from protein sequences☆505Updated 2 years ago
- The ViennaRNA Package☆378Updated 3 weeks ago
- User friendly and accurate binder design pipeline☆975Updated 5 months ago
- Modified version of Alphafold to divide CPU part (MSA and template searching) and GPU part. This can accelerate Alphafold when predicting…☆173Updated last year
- HMMER: biological sequence analysis using profile HMMs☆393Updated 3 months ago
- Making Protein Design accessible to all via Google Colab!☆868Updated last month
- A comprehensive library for computational molecular biology☆916Updated last week
- Bilingual Language Model for Protein Sequence and Structure☆290Updated last year
- Fast, accurate antibody structure prediction from deep learning on massive set of natural antibodies☆399Updated 2 years ago
- Deep functional residue identification☆343Updated 2 years ago
- MaSIF- Molecular surface interaction fingerprints. Geometric deep learning to decipher patterns in molecular surfaces.☆718Updated last year
- ☆569Updated 9 months ago
- A collection of *fold* tools☆300Updated 5 months ago
- Tasks Assessing Protein Embeddings (TAPE), a set of five biologically relevant semi-supervised learning tasks spread across different dom…☆729Updated 3 years ago
- Automatically exported from code.google.com/p/cdhit☆717Updated 3 years ago
- ☆255Updated last year
- CLEAN: a contrastive learning model for high-quality functional prediction of proteins☆303Updated 9 months ago
- ☆780Updated 7 months ago
- Official repository for the ProteinGym benchmarks☆381Updated last week
- A dependency-free cross-platform swiss army knife for PDB files.☆439Updated 3 months ago
- OmegaFold Release Code☆604Updated 3 years ago