soedinglab / hh-suite
Remote protein homology detection suite.
☆560Updated 4 months ago
Alternatives and similar repositories for hh-suite:
Users that are interested in hh-suite are comparing it to the libraries listed below
- Foldseek enables fast and sensitive comparisons of large structure sets.☆912Updated last week
- AlphaFold2 non-docker setup☆352Updated last year
- ColabFold on your local PC☆660Updated this week
- Evolutionary couplings from protein and RNA sequence alignments☆257Updated last week
- UniRep model, usage, and examples.☆348Updated 2 years ago
- MMseqs2: ultra fast and sensitive search and clustering suite☆1,573Updated last week
- RoseTTAFold2 protein/nucleic acid complex prediction☆351Updated 9 months ago
- Jupyter Notebooks for learning the PyRosetta platform for biomolecular structure prediction and design☆547Updated 7 months ago
- Fast, accurate antibody structure prediction from deep learning on massive set of natural antibodies☆348Updated last year
- User friendly and accurate binder design pipeline☆463Updated this week
- Get protein embeddings from protein sequences☆478Updated last year
- HMMER: biological sequence analysis using profile HMMs☆336Updated last month
- ☆254Updated last week
- Making Protein Design accessible to all via Google Colab!☆694Updated 2 weeks ago
- MaSIF- Molecular surface interaction fingerprints. Geometric deep learning to decipher patterns in molecular surfaces.☆631Updated 8 months ago
- Modified version of Alphafold to divide CPU part (MSA and template searching) and GPU part. This can accelerate Alphafold when predicting…☆159Updated last year
- Deep functional residue identification☆315Updated last year
- ☆696Updated 7 months ago
- Automatically exported from code.google.com/p/cdhit☆655Updated 2 years ago
- Bilingual Language Model for Protein Sequence and Structure☆225Updated 2 months ago
- AutoDock Vina☆684Updated last week
- A comprehensive library for computational molecular biology☆751Updated this week
- ☆240Updated 7 months ago
- Tasks Assessing Protein Embeddings (TAPE), a set of five biologically relevant semi-supervised learning tasks spread across different dom…☆680Updated 2 years ago
- Public RFDiffusionAA repo☆370Updated 8 months ago
- CLEAN: a contrastive learning model for high-quality functional prediction of proteins☆250Updated last week
- Efficient evolution from protein language models☆192Updated last year
- ☆290Updated 7 months ago
- The ViennaRNA Package☆326Updated 4 months ago
- Antibody Numbering and Antigen Receptor ClassIfication☆202Updated 9 months ago