facebookresearch / esm
Evolutionary Scale Modeling (esm): Pretrained language models for proteins
☆3,565Updated last year
Alternatives and similar repositories for esm:
Users that are interested in esm are comparing it to the libraries listed below
- Trainable, memory-efficient, and GPU-friendly PyTorch reproduction of AlphaFold 2☆2,979Updated last month
- ProtTrans is providing state of the art pretrained language models for proteins. ProtTrans was trained on thousands of GPUs from Summit a…☆1,192Updated 2 months ago
- Listing of papers about machine learning for proteins.☆1,600Updated 10 months ago
- Making Protein folding accessible to all!☆2,195Updated last week
- Code for the ProteinMPNN paper☆1,232Updated 8 months ago
- Code for running RFdiffusion☆2,130Updated last week
- List of papers about Proteins Design using Deep Learning☆1,635Updated this week
- To eventually become an unofficial Pytorch implementation / replication of Alphafold2, as details of the architecture get released☆1,597Updated 2 years ago
- Implementation of DiffDock: Diffusion Steps, Twists, and Turns for Molecular Docking☆1,220Updated 7 months ago
- ☆1,871Updated last week
- OmegaFold Release Code☆577Updated 2 years ago
- Tasks Assessing Protein Embeddings (TAPE), a set of five biologically relevant semi-supervised learning tasks spread across different dom…☆688Updated 2 years ago
- Official release of the ProGen models☆645Updated last year
- This package contains deep learning models and related scripts for RoseTTAFold☆2,132Updated last year
- Making Protein Design accessible to all via Google Colab!☆713Updated last week
- Foldseek enables fast and sensitive comparisons of large structure sets.☆959Updated this week
- ☆525Updated 2 weeks ago
- Implementation of Alpha Fold 3 from the paper: "Accurate structure prediction of biomolecular interactions with AlphaFold3" in PyTorch☆785Updated last week
- A trainable PyTorch reproduction of AlphaFold 3.☆1,070Updated last week
- ColabFold on your local PC☆684Updated this week
- Generation of protein sequences and evolutionary alignments via discrete diffusion models☆577Updated 2 months ago
- Protein Graph Library☆1,084Updated last month
- Diffusion models of protein structure; trigonometry and attention are all you need!☆541Updated last year
- Jupyter Notebooks for learning the PyRosetta platform for biomolecular structure prediction and design☆560Updated 8 months ago
- DNABERT: pre-trained Bidirectional Encoder Representations from Transformers model for DNA-language in genome☆653Updated last year
- A comprehensive library for computational molecular biology☆784Updated last week
- Implementation of Alphafold 3 from Google Deepmind in Pytorch☆1,408Updated 2 months ago
- A generative model for programmable protein design☆730Updated last year
- Get protein embeddings from protein sequences☆486Updated last year
- ☆560Updated last year