Alternatives and similar repositories for AFProfile:

Users that are interested in AFProfile are comparing it to the libraries listed below

• dina-lab3D / CombFold
  ☆80Updated 5 months ago
• Wublab / Pythia
  Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations
  ☆50Updated last month
• Kuhlman-Lab / evopro
  ☆73Updated last month
• GMdSilva / gms_natcomms_1705932980_data
  Data sharing for High-throughput Prediction of Changes in Protein Conformational Distributions with Subsampled AlphaFold2
  ☆38Updated 9 months ago
• bene837 / af2seq
  ☆43Updated 5 months ago
• sokrypton / af2bind
  ☆49Updated last month
• data2code / afpdb
  Efficient manipulation of protein structures in Python
  ☆51Updated 4 months ago
• patrickbryant1 / MoLPC
  Modelling of Large Protein Complexes
  ☆37Updated last year
• jproney / AF2Rank
  ☆100Updated 2 years ago
• liuyf020419 / SCUBA-D
  ☆54Updated 11 months ago
• marcellszi / rna3db
  A dataset for training and benchmarking deep learning models for RNA structure prediction
  ☆45Updated 2 months ago
• AspirinCode / AlphaPPImd
  Exploring the conformational ensembles of protein-protein complexes with transformer-based generative neural networks
  ☆27Updated 9 months ago
• meilerlab / HyperMPNN
  HyperMPNN ‒ A general strategy to design thermostable proteins learned from hyperthermophiles
  ☆50Updated 3 weeks ago
• WillHua127 / GENzyme
  Official repository of GENzyme
  ☆42Updated 3 months ago
• idlutz / protein-backbone-MCTS
  ☆47Updated 8 months ago
• LBM-EPFL / CARBonAra
  Deep learning framework for protein sequence design from a backbone scaffold that can leverage the molecular context including non-protei…
  ☆36Updated 3 months ago
• leandroradusky / pyfoldx
  pyFoldX: python bindings for FoldX.
  ☆44Updated 3 years ago
• Kortemme-Lab / flex_ddG_tutorial
  ☆101Updated 2 years ago
• patrickbryant1 / Cfold
  Structure prediction of alternative protein conformations
  ☆74Updated 2 weeks ago
• Graylab / AlphaRED
  AlphaFold-initiated replica exchange protein docking
  ☆71Updated this week
• delalamo / af2_conformations
  A series of scripts that facilitate the prediction of protein structures in multiple conformations using AlphaFold2
  ☆94Updated last year
• jsunn-y / ALDE
  Active Learning-Assisted Directed Evolution for Protein Engineering
  ☆41Updated 3 months ago
• ohuelab / ColabFold-cycpep-dock
  Making Protein folding accessible to all!
  ☆21Updated last year
• iambic-therapeutics / np-bench
  A benchmark for 3D biomolecular structure prediction models
  ☆53Updated 2 months ago
• rochoa85 / PepFun
  Bioinformatics and Cheminformatics protocols for peptide analysis
  ☆40Updated 2 years ago
• KULL-Centre / _2022_ML-ddG-Blaabjerg
  ☆49Updated 9 months ago
• ShintaroMinami / PyDSSP
  A simplified implementation of DSSP algorithm for PyTorch and NumPy
  ☆80Updated last week