Rostlab / SeqVecLinks
Modelling the Language of Life - Deep Learning Protein Sequences
☆119Updated 4 years ago
Alternatives and similar repositories for SeqVec
Users that are interested in SeqVec are comparing it to the libraries listed below
Sorting:
- Multi-task and masked language model-based protein sequence embedding models.☆102Updated 4 years ago
- Modelling the Language of Life - Deep Learning Protein Sequences☆73Updated 4 years ago
- A generative latent variable model for biological sequence families.☆224Updated 3 years ago
- ☆127Updated 4 years ago
- Efficient evolution from protein language models☆210Updated last year
- ☆192Updated 3 years ago
- Deep functional residue identification☆324Updated 2 years ago
- A machine-learning package for navigating combinatorial protein fitness landscapes.☆126Updated 3 years ago
- Protein Residue-Residue Contacts from Correlated Mutations predicted quickly and accurately.☆108Updated last year
- ☆109Updated 3 years ago
- ☆107Updated last year
- Bilingual Language Model for Protein Sequence and Structure☆256Updated 6 months ago
- ☆248Updated 11 months ago
- Antibody Numbering and Antigen Receptor ClassIfication☆221Updated last year
- Evolutionary couplings from protein and RNA sequence alignments☆272Updated 4 months ago
- BioPhi is an open-source antibody design platform. It features methods for automated antibody humanization (Sapiens), humanness evaluatio…☆196Updated 2 months ago
- trRosetta for protein design☆182Updated 4 years ago
- Deep learning models and structure realization scripts for the DeepAb antibody structure prediction method.☆160Updated 2 years ago
- Repository for publicly available deep learning models developed in Rosetta community☆117Updated 3 years ago
- Collecting AMP MIC data from different sources, then running a GAN to output promising sequences☆79Updated 11 months ago
- bio-transformers is a wrapper on top of the ESM/Protbert model, trained on millions on proteins and used to predict embeddings.☆152Updated last year
- Convenience Python APIs for antibody numbering using ANARCI☆99Updated last month
- RNA Secondary Structure Prediction using an Ensemble of Two-dimensional Deep Neural Networks and Transfer Learning.☆104Updated last month
- Get protein embeddings from protein sequences☆493Updated 2 years ago
- Language modeling of viral evolution☆144Updated 2 years ago
- AbLang: A language model for antibodies☆143Updated last year
- Public repository describing training and testing of AntiBERTa.☆59Updated 2 years ago
- Universal Structure Alignment of Monomeric and Complex Structure of Nucleic Acids and Proteins☆151Updated 2 months ago
- A structure-aware interpretable deep learning model for sequence-based prediction of protein-protein interactions☆100Updated last week
- predicting peptide-protein interactions☆132Updated last year