Alternatives and similar repositories for deepgoplus:

Users that are interested in deepgoplus are comparing it to the libraries listed below

• bio-ontology-research-group / deepgo
  Function prediction using a deep ontology-aware classifier
  ☆81Updated 2 years ago
• ml4bio / Dense-Homolog-Retrieval
  Nature Biotechnology: Ultra-fast, sensitive detection of protein remote homologs using deep dense retrieval
  ☆99Updated 4 months ago
• fteufel / signalp-6.0
  Multi-class signal peptide prediction and structure decoding model.
  ☆83Updated 11 months ago
• tbepler / prose
  Multi-task and masked language model-based protein sequence embedding models.
  ☆99Updated 3 years ago
• Rostlab / goPredSim
  ☆44Updated last month
• mheinzinger / SeqVec
  Modelling the Language of Life - Deep Learning Protein Sequences
  ☆73Updated 4 years ago
• mheinzinger / ProstT5
  Bilingual Language Model for Protein Sequence and Structure
  ☆205Updated 2 weeks ago
• Rostlab / SeqVec
  Modelling the Language of Life - Deep Learning Protein Sequences
  ☆120Updated 4 years ago
• brianhie / evolocity
  Evolutionary velocity with protein language models
  ☆84Updated last year
• HannesStark / protein-localization
  Using Transformer protein embeddings with a linear attention mechanism to make SOTA de-novo predictions for the subcellular location of p…
  ☆58Updated last year
• ntranoslab / esm-variants
  ☆69Updated last year
• OATML-Markslab / EVE
  Official repository for the paper "Large-scale clinical interpretation of genetic variants using evolutionary data and deep learning". Jo…
  ☆163Updated 10 months ago
• flatironinstitute / deepblast
  Neural Networks for Protein Sequence Alignment
  ☆117Updated 2 months ago
• HarveyYan / RNAonGraph
  A repository for neural representational learning of RNA secondary structures
  ☆31Updated 4 years ago
• jaswindersingh2 / SPOT-RNA
  RNA Secondary Structure Prediction using an Ensemble of Two-dimensional Deep Neural Networks and Transfer Learning.
  ☆97Updated 2 years ago
• mana438 / RNABERT
  ☆50Updated last year
• nstrodt / UDSMProt
  Protein sequence classification with self-supervised pretraining
  ☆83Updated 3 years ago
• hendrixlab / bpRNA
  bpRNA: Large-scale Annotation and Analysis of RNA Secondary Structure
  ☆44Updated last year
• kuixu / alphafold
  Install alphafold on the local machine, get out of docker.
  ☆101Updated 3 years ago
• DessimozLab / fold_tree
  snakemake pipeline for creating trees from sequence sets
  ☆70Updated last week
• google-research / proteinfer
  Deep networks for protein functional inference
  ☆164Updated 2 months ago
• samsledje / D-SCRIPT
  A structure-aware interpretable deep learning model for sequence-based prediction of protein-protein interactions
  ☆91Updated 4 months ago
• KarchinLab / bigmhc
  BigMHC predicts MHC-I (neo)epitope presentation and immunogenicity
  ☆48Updated 8 months ago
• Shen-Lab / TALE
  Transformer-based protein function Annotation with joint feature-Label Embedding
  ☆34Updated last month
• mxfold / mxfold2
  MXfold2: RNA secondary structure prediction using deep learning with thermodynamic integration
  ☆120Updated 2 months ago
• jhmlam / NucleicNet
  ☆35Updated 2 years ago
• flatironinstitute / DeepFRI
  Deep functional residue identification
  ☆313Updated last year
• tttianhao / CLEAN
  CLEAN: a contrastive learning model for high-quality functional prediction of proteins
  ☆241Updated 5 months ago
• Superzchen / iLearnPlus
  iLearnPlus is the first machine-learning platform with both graphical- and web-based user interface that enables the construction of auto…
  ☆99Updated 9 months ago
• soedinglab / CCMpred
  Protein Residue-Residue Contacts from Correlated Mutations predicted quickly and accurately.
  ☆107Updated last year