cebel / pyuniprot
Python package to query and analyse UniProt
☆22Updated 4 years ago
Related projects: ⓘ
- A Bio2BEL package for integrating pathway-related information from KEGG in BEL☆13Updated 2 years ago
- Align sequences and then parse features.☆17Updated 3 weeks ago
- Tools for munging genomic data☆21Updated 5 years ago
- ☆14Updated 8 years ago
- Interpretable genotype-phenotype landscape modeling☆33Updated 9 months ago
- An Improved Algorithm to Measure the Semantic Similarity of Gene Ontology Terms☆17Updated 4 years ago
- PyBioPAX: A python implementation of the BioPAX object model☆23Updated 4 months ago
- A Python package for benchmarking pathway database with functional enrichment and classification methods☆13Updated 3 years ago
- A package for designing activity-informed nucleic acid diagnostics for viruses.☆29Updated last year
- A Python package for gene network analysis☆32Updated 2 years ago
- Useful functions for manipulating Multiplex Assay of Variant Effect datasets.☆10Updated 4 months ago
- Namespace encoding hierarchical relationships between proteins, protein families, and protein complexes.☆12Updated 3 years ago
- Cython bindings and Python interface to trimAl, a tool for automated alignment trimming. Now with SIMD!☆20Updated 3 weeks ago
- Proteins as words, genomes as documents.☆20Updated 3 years ago
- A package for making tree-based visualizations for embedding vectors☆9Updated last year
- Percentile-normalization method for correcting batch effects in case-control studies☆12Updated 4 years ago
- Methods for mapping genomic data onto 3D protein structure.☆27Updated 2 years ago
- Connect the dots in networks.☆16Updated 4 years ago
- MAVE-NN: genotype-phenotype maps from multiplex assays of variant effect☆24Updated 3 months ago
- Seqnature: incorporate SNPs and Indels into a reference genome☆15Updated 8 years ago
- Companion to "A genome-wide almanac of co-essential modules assigns function to uncharacterized genes" (https://doi.org/10.1101/827071)☆27Updated 2 years ago
- Table of Multiplexed Assay of Variant Effect (MAVE) studies☆10Updated last year
- Parsing MHC nomenclature in the wild☆16Updated 5 months ago
- draw sequence logos tailored to deep mutational scanning (DMS) data☆12Updated 11 months ago
- A metadata commons to store research software metadata☆40Updated this week
- pathoscore evaluates variant pathogenicity tools and scores.☆21Updated 2 years ago
- A 3-Dimensional View of Human Metabolism and Disease☆25Updated 6 years ago
- ClinVar Mapping and Annotation Toolkit☆18Updated last week
- ☆25Updated this week
- PyIOmica (pyiomica) is a Python package for omics analyses.☆15Updated last year