Code for generating model and predictions for CAFA5 competition 2023 (4th place solution)
☆19May 24, 2024Updated 2 years ago
Alternatives and similar repositories for cafa5
Users that are interested in cafa5 are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Transformer for protein function prediction (version 2)☆14Jun 5, 2026Updated last month
- InterLabelGO+: Unraveling label correlations in protein function prediction☆16Aug 5, 2025Updated 11 months ago
- ☆14Sep 3, 2024Updated last year
- ☆61Sep 11, 2024Updated last year
- A Python Tool for Benchmarking Ontological Classification Methods☆54Jan 19, 2026Updated 6 months ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- ☆20Sep 19, 2025Updated 10 months ago
- Functional ANnoTAtion based on embedding space SImilArity☆18Updated this week
- ☆17Dec 9, 2024Updated last year
- Pan gGnome Viewer☆10Jul 10, 2025Updated last year
- DeepGO with Fuzzy DL☆34Sep 19, 2022Updated 3 years ago
- Transformer-based protein function Annotation with joint feature-Label Embedding☆38Dec 18, 2024Updated last year
- An official implementation of Protein Representation Learning via Knowledge Enhanced Primary Structure Reasoning☆28Jul 14, 2023Updated 3 years ago
- Structure-Informed Protein Language Model☆39Feb 15, 2024Updated 2 years ago
- BICSEQ2 pipeline for processing CPTAC3 somatic WGS CNA☆16Apr 13, 2021Updated 5 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Cross-protein transfer learning for variant effect prediction☆21Sep 13, 2023Updated 2 years ago
- pangenome analyses for complete genomes of great apes (and gibbon)☆20Oct 12, 2024Updated last year
- [ICML-23 ORAL] ProtST: Multi-Modality Learning of Protein Sequences and Biomedical Texts☆105Oct 16, 2023Updated 2 years ago
- A NumPy port of the foldseek code for encoding protein structures to 3di.☆82Aug 22, 2025Updated 11 months ago
- ProtNote is a multimodal deep learning model that leverages free-form text to enable both supervised and zero-shot protein function predi…☆63Apr 29, 2025Updated last year
- 基于Qwen2.5模型、使用DISC-Law-SFT-Pair数据集微调的法律大模型☆12Dec 29, 2024Updated last year
- Run multiple programs to check if a VCF is usable☆11May 15, 2020Updated 6 years ago
- ☆32Jan 16, 2024Updated 2 years ago
- ☆21Oct 22, 2024Updated last year
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- PO2Vec: bidirectional partial-order embeddings encode the GO hierarchy, enabling one-shot extreme multi-label function classification.☆51Mar 17, 2025Updated last year
- A simulation engine for compartmental models☆15Updated this week
- 本项目采用Firefly模型训练框架，使用LLAMA-2模型对多项选择阅读理解任务（Multiple Choice MRC）进行微调，取得了显著的进步。☆11Sep 16, 2023Updated 2 years ago
- ☆15Jun 19, 2026Updated last month
- ☆39Jun 9, 2025Updated last year
- DeepGO with GOPlus axioms☆104Oct 23, 2025Updated 9 months ago
- ☆10Apr 1, 2024Updated 2 years ago
- ProtMamba: a homology-aware but alignment-free protein state space model☆89Jun 3, 2025Updated last year
- Chat offline with open-source LLMs like deepseek-r1, nemotron, qwen, llama and more all through a simple R package powered by Shiny and O…☆22Mar 12, 2025Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- An Example login application☆11Dec 14, 2017Updated 8 years ago
- TreeGrafter is a new software tool for annotating uncharacterized protein sequences, using annotated phylogenetic trees.☆12Apr 13, 2026Updated 3 months ago
- Protein Structure Transformer (PST): Endowing pretrained protein language models with structural knowledge☆47Oct 17, 2024Updated last year
- pretrained LookingGlass language model for biological read-length DNA sequences, and related models derived from transfer learning☆17Feb 19, 2026Updated 5 months ago
- ☆16Jun 14, 2024Updated 2 years ago
- Easy to use and efficient implementations of Protein Language Models☆50Updated this week
- 'Node Workers' for the Swarm City Dapp.☆14Apr 27, 2022Updated 4 years ago