Alternatives and similar repositories for cafa5

Users that are interested in cafa5 are comparing it to the libraries listed below

• Amelie-Schreiber / protein_mutation_scoring
  Some scoring functions for predicting the effects of mutations on protein sequences using ESM-2
  ☆11Updated 2 years ago
• MSDLLCpapers / promb
  Humanness of de-novo designed proteins
  ☆34Updated 6 months ago
• DeepRank / DeepRank-GNN-esm
  Graph Network for protein-protein interface including language model features
  ☆33Updated last year
• Rostlab / bindPredict
  Prediction of binding residues for metal ions, nucleic acids, and small molecules.
  ☆34Updated 3 months ago
• the-protein-engineering-tournament / pet-pilot-2023
  Results and data from the pilot round of the Protein Engineering Tournament
  ☆30Updated 8 months ago
• Doudna-lab / GARNET_DL
  ☆36Updated 11 months ago
• beckham-lab / EpHod
  Machine learning prediction of enzyme optimum pH
  ☆48Updated 7 months ago
• oxpig / CaLM
  Protein language model trained on coding DNA
  ☆52Updated last year
• brennanaba / ImmuneBuilder
  Predict the structure of immune receptor proteins
  ☆56Updated last year
• AIforGreatGood / biotransfer
  Machine learning-driven antibody design
  ☆62Updated 2 years ago
• yjcyxky / antibody-dl
  A Collection of Platform, Tools, and Resources for Antibody Engineering
  ☆21Updated 2 years ago
• moritzgls / ESM-Effect
  ☆15Updated 10 months ago
• anton-bushuiev / ProteinTTT
  One protein is all you need
  ☆57Updated 2 weeks ago
• KULL-Centre / _2022_ML-ddG-Blaabjerg
  ☆54Updated 4 months ago
• rohitsinghlab / raygun
  Template-based protein design with Raygun
  ☆76Updated last week
• idmjky / EvolvePro
  PLM based active learning model for protein engineering
  ☆84Updated last year
• steineggerlab / colabfold-protocol
  ColabFold protocol
  ☆57Updated last year
• Rostlab / EAT
  Embedding-based annotation transfer (EAT) uses Euclidean distance between vector representations (embeddings) of proteins to transfer ann…
  ☆38Updated 3 months ago
• jlparkI / AntPack
  Tools for annotation, processing and ML for antibody sequences
  ☆34Updated this week
• agitter / adaptyvbio-egfr
  Sequences from Adaptyv Bio’s EGFR Protein Design Competition
  ☆15Updated 3 months ago
• seanrjohnson / protein_scoring
  Generating and scoring novel enzyme sequences with a variety of models and metrics
  ☆72Updated last week
• bio-ontology-research-group / deepgozero
  DeepGO with Fuzzy DL
  ☆31Updated 3 years ago
• dohlee / antiberty-pytorch
  An unofficial re-implementation of AntiBERTy, an antibody-specific protein language model, in PyTorch.
  ☆25Updated last year
• 3BioCompBio / pyScoMotif
  Python tool for the discovery of similar 3D structural motifs across protein structures.
  ☆35Updated 2 years ago
• ahaldane / Mi3-GPU
  ☆18Updated 9 months ago
• minmarg / gtalign_alpha
  GTalign, high-performance protein structure alignment, superposition and search
  ☆52Updated 3 months ago
• SNU-CSSB / RF2-Lite
  ☆31Updated last year
• kansil / PROBE
  Trainable representation analysis study repository
  ☆44Updated 3 years ago
• Faezov / PDBrenum
  ☆30Updated 6 months ago
• gf712 / AbPyTools
  Python package for analysis of antibody heavy and light chains
  ☆25Updated 5 years ago