Code for generating model and predictions for CAFA5 competition 2023 (4th place solution)
☆19Aug 3, 2026Updated last month
Alternatives and similar repositories for cafa5
Users that are interested in cafa5 are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Transformer for protein function prediction (version 2)☆14Updated this week
- InterLabelGO+: Unraveling label correlations in protein function prediction☆16Aug 5, 2025Updated last year
- ☆14Sep 3, 2024Updated 2 years ago
- A Python Tool for Benchmarking Ontological Classification Methods☆54Jan 19, 2026Updated 7 months ago
- Functional ANnoTAtion based on embedding space SImilArity☆20Jul 23, 2026Updated last month
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆17Dec 9, 2024Updated last year
- DeepGO with Fuzzy DL☆34Sep 19, 2022Updated 3 years ago
- An official implementation of Protein Representation Learning via Knowledge Enhanced Primary Structure Reasoning☆28Jul 14, 2023Updated 3 years ago
- Structure-Informed Protein Language Model☆40Feb 15, 2024Updated 2 years ago
- BICSEQ2 pipeline for processing CPTAC3 somatic WGS CNA☆16Apr 13, 2021Updated 5 years ago
- Cross-protein transfer learning for variant effect prediction☆21Sep 13, 2023Updated 2 years ago
- pangenome analyses for complete genomes of great apes (and gibbon)☆20Oct 12, 2024Updated last year
- ☆13Jun 25, 2025Updated last year
- [ICML-23 ORAL] ProtST: Multi-Modality Learning of Protein Sequences and Biomedical Texts☆106Oct 16, 2023Updated 2 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- A NumPy port of the foldseek code for encoding protein structures to 3di.☆82Aug 22, 2025Updated last year
- ☆22Apr 15, 2024Updated 2 years ago
- ProtNote is a multimodal deep learning model that leverages free-form text to enable both supervised and zero-shot protein function predi…☆64Apr 29, 2025Updated last year
- 基于Qwen2.5模型、使用DISC-Law-SFT-Pair数据集微调的法律大模型☆11Dec 29, 2024Updated last year
- association analysis of distance matrices using gradient forest approach☆16Jul 1, 2026Updated 2 months ago
- Run multiple programs to check if a VCF is usable☆11May 15, 2020Updated 6 years ago
- ☆31Jan 16, 2024Updated 2 years ago
- ☆21Oct 22, 2024Updated last year
- PO2Vec: bidirectional partial-order embeddings encode the GO hierarchy, enabling one-shot extreme multi-label function classification.☆48Mar 17, 2025Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- A simulation engine for compartmental models☆17Updated this week
- 本项目采用Firefly模型训练框架,使用LLAMA-2模型对多项选择阅读理解任务(Multiple Choice MRC)进行微调,取得了显著的进步。☆11Sep 16, 2023Updated 2 years ago
- ☆15Jun 19, 2026Updated 2 months ago
- p-IgGen: A Generative Paired Antibody Language Model☆13May 6, 2025Updated last year
- ☆40Jun 9, 2025Updated last year
- DeepGO with GOPlus axioms☆104Oct 23, 2025Updated 10 months ago
- ☆10Apr 1, 2024Updated 2 years ago
- ProtMamba: a homology-aware but alignment-free protein state space model☆90Jun 3, 2025Updated last year
- Protein Structure Transformer (PST): Endowing pretrained protein language models with structural knowledge☆47Oct 17, 2024Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- pretrained LookingGlass language model for biological read-length DNA sequences, and related models derived from transfer learning☆17Feb 19, 2026Updated 6 months ago
- Contrastive learning harmonizing protein language models and natural language models☆44Jun 12, 2024Updated 2 years ago
- ☆16Jun 14, 2024Updated 2 years ago
- Easy to use and efficient implementations of Protein Language Models☆51Aug 26, 2026Updated last week
- 'Node Workers' for the Swarm City Dapp.☆14Apr 27, 2022Updated 4 years ago
- General purpose utility related to GAF files☆37Aug 6, 2026Updated last month
- The Jackson Laboratory Data Science Nextflow based analysis workflows☆26Updated this week