Alternatives and similar repositories for cafa5

Users that are interested in cafa5 are comparing it to the libraries listed below

• Rostlab / bindPredict
  Prediction of binding residues for metal ions, nucleic acids, and small molecules.
  ☆32Updated 7 months ago
• DeepRank / DeepRank-GNN-esm
  Graph Network for protein-protein interface including language model features
  ☆32Updated last year
• brennanaba / ImmuneBuilder
  Predict the structure of immune receptor proteins
  ☆52Updated 8 months ago
• AIforGreatGood / biotransfer
  Machine learning-driven antibody design
  ☆60Updated 2 years ago
• HySonLab / Directed_Evolution
  Protein Design by Machine Learning guided Directed Evolution
  ☆43Updated 3 months ago
• the-protein-engineering-tournament / pet-pilot-2023
  Results and data from the pilot round of the Protein Engineering Tournament
  ☆30Updated 3 months ago
• seanrjohnson / protein_scoring
  Generating and scoring novel enzyme sequences with a variety of models and metrics
  ☆69Updated 3 weeks ago
• microsoft / protnote
  ProtNote is a multimodal deep learning model that leverages free-form text to enable both supervised and zero-shot protein function predi…
  ☆51Updated 2 months ago
• beckham-lab / EpHod
  Machine learning prediction of enzyme optimum pH
  ☆44Updated 2 months ago
• CongLabCode / RoseTTAFold2-PPI
  Fast deep learning methods for large-scale protein-protein interaction screening
  ☆46Updated 2 months ago
• Doudna-lab / GARNET_DL
  ☆35Updated 6 months ago
• oxpig / CaLM
  Protein language model trained on coding DNA
  ☆47Updated 8 months ago
• maslov-group / DR-BERT
  ☆24Updated 2 years ago
• westlake-repl / Evolla
  ProteinChat: A frontier protein-language generative model designed to decode the molecular language of proteins.
  ☆52Updated 4 months ago
• AbSciBio / igdesign
  ☆41Updated 6 months ago
• KULL-Centre / _2022_ML-ddG-Blaabjerg
  ☆50Updated 3 months ago
• Rostlab / EAT
  Embedding-based annotation transfer (EAT) uses Euclidean distance between vector representations (embeddings) of proteins to transfer ann…
  ☆37Updated 5 months ago
• jlparkI / AntPack
  Tools for annotation, processing and ML for antibody sequences
  ☆31Updated this week
• uci-cbcl / esm-efficient
  Efficient implementatin of ESM family.
  ☆58Updated 5 months ago
• szczurek-lab / hydramp
  HydrAMP: a deep generative model for antimicrobial peptide discovery
  ☆50Updated 7 months ago
• ahaldane / Mi3-GPU
  ☆18Updated 4 months ago
• idmjky / EvolvePro
  PLM based active learning model for protein engineering
  ☆82Updated 11 months ago
• yjcyxky / antibody-dl
  A Collection of Platform, Tools, and Resources for Antibody Engineering
  ☆16Updated 2 years ago
• MSDLLCpapers / promb
  Humanness of de-novo designed proteins
  ☆19Updated last month
• kansil / PROBE
  Trainable representation analysis study repository
  ☆43Updated 3 years ago
• CongLabCode / DPAM
  A domain parser for Alphafold models
  ☆38Updated last year
• rohitsinghlab / raygun
  Template-based protein design with Raygun
  ☆70Updated last month
• BEAM-Labs / BALM
  Inference code for Bio-Inspired Antibody Language Model
  ☆25Updated 10 months ago
• bio-ontology-research-group / deepgozero
  DeepGO with Fuzzy DL
  ☆30Updated 2 years ago
• 3BioCompBio / pyScoMotif
  Python tool for the discovery of similar 3D structural motifs across protein structures.
  ☆28Updated last year