GSLBiotech / clustal-omegaLinks
Multiple sequence aligner for protein and DNA/RNA.
☆19Updated 7 years ago
Alternatives and similar repositories for clustal-omega
Users that are interested in clustal-omega are comparing it to the libraries listed below
Sorting:
- Cython bindings and Python interface to FAMSA, an algorithm for ultra-scale multiple sequence alignments.☆36Updated this week
- A flexible and modular software suite for domain-based gene neighborhood and protein search, extraction, and clustering.☆21Updated 7 months ago
- Software for predicting translation initiation rates in bacteria☆29Updated 2 months ago
- A quick and easy way to download the genomes/predicted proteins of taxa available in JGI's Genome Portal.☆38Updated 4 months ago
- Cython bindings and Python interface to MUSCLE v5, a highly efficient and accurate multiple sequence alignment software.☆23Updated last year
- Metagenome analysis using the Kraken software suite☆35Updated 3 years ago
- A Pure-Python parser of HMMER3 output☆18Updated last year
- DeepSig - Predictor of signal peptides in proteins based on deep learning☆26Updated 2 years ago
- scripts for predicting natural product activity from biosynthetic gene cluster sequences☆24Updated last month
- ☆27Updated last year
- Simple phylogenetic tree visualization python package for phylogenetic analysis☆55Updated last year
- Cython bindings and Python interface to trimAl, a tool for automated alignment trimming. Now with SIMD!☆27Updated last month
- A Python package for discovery, annotation, and analysis of gene clusters in genomics or metagenomics data sets.☆21Updated 3 years ago
- MacSyFinder - Detection of macromolecular systems in protein datasets using systems modelling and similarity search.☆66Updated last week
- SMBGC Annotation using Neural Networks Trained on Interpro Signatures☆29Updated 6 months ago
- A command line tool to identify and annotate small proteins in microbial sequencing datasets.☆24Updated 2 years ago
- VirID: An integrated platform for the discovery and characterization of RNA Viruses☆22Updated 7 months ago
- Python bindings for the TaxonKit library☆40Updated 3 months ago
- ☆18Updated 4 years ago
- ORFFinder in Python☆15Updated last year
- MetaLogo: a heterogeneity-aware sequence logo generator and aligner☆21Updated 2 years ago
- ☆11Updated 7 months ago
- On-Target and Off-Target Scoring Algorithms for CRISPR gRNAs☆21Updated 3 months ago
- Machine learning for accurate identification and classification of CRISPR-Cas systems☆23Updated 10 months ago
- Predict oxygen, temperature, salinity, and pH preferences of bacteria and archaea from a genome☆57Updated 6 months ago
- Machine-learning-based general bacterial promoter prediction tool.☆51Updated 2 years ago
- GCN classifier for phage taxanomy classification☆31Updated 11 months ago
- Deep learning embedding for nucleotide sequences☆19Updated 6 months ago
- Clustering the NCBI nr database with mmseq2 (90% length, 90% identity). Inspired by the NCBI's experimental ClusteredNR database.☆23Updated 2 years ago
- Interactive tutorials for using scikit-bio in biological research☆28Updated 2 months ago