Shen-Lab / TALELinks
Transformer-based protein function Annotation with joint feature-Label Embedding
☆35Updated 5 months ago
Alternatives and similar repositories for TALE
Users that are interested in TALE are comparing it to the libraries listed below
Sorting:
- DeepGraphGO: graph neural network for large-scale, multispecies protein function prediction☆35Updated 3 years ago
- Protein language model trained on coding DNA☆47Updated 7 months ago
- ☆68Updated 8 months ago
- GraphSite: protein-DNA binding site prediction using graph transformer and predicted protein structures☆59Updated 10 months ago
- ☆18Updated last year
- Graph-based representation learning method for protein function prediction☆24Updated 4 years ago
- DeepGO with Fuzzy DL☆30Updated 2 years ago
- A structure-aware interpretable deep learning model for sequence-based prediction of protein-protein interactions☆99Updated 8 months ago
- ☆37Updated 4 months ago
- Accurate prediction of protein intrinsic disorder and its functions using graph-based interaction protein language model☆20Updated 9 months ago
- Fast and accurate protein function prediction from sequence through pretrained language model and homology-based label diffusion☆39Updated 10 months ago
- ☆33Updated 2 years ago
- Struct2GO:protein function prediction based on Graph pooling algorithm and AlphaFold2 structure information☆27Updated last year
- ☆68Updated last month
- Nature Computational Science: Unbiased organism-agnostic and highly sensitive signal peptide predictor with deep protein language model☆30Updated 3 weeks ago
- Feature map and function annotation of Proteins☆33Updated 11 months ago
- ☆35Updated 9 months ago
- Repository for Protein-Vec, a protein embedding mixture of experts model☆37Updated last year
- ☆46Updated 6 months ago
- Code and data to reproduce analyses in Biswas et al. (2020) "Low-N protein engineering with data-efficient deep learning".☆58Updated 4 years ago
- Code for reproducing results of "Unsupervised embeddings is all you need for protein function prediction"☆39Updated last year
- Embedding-based annotation transfer (EAT) uses Euclidean distance between vector representations (embeddings) of proteins to transfer ann…☆36Updated 4 months ago
- Antibody Annotation - Annotate VH and VL sequences (FR and CDR) in Python☆30Updated last year
- Using Transformer protein embeddings with a linear attention mechanism to make SOTA de-novo predictions for the subcellular location of p…☆64Updated last year
- Prediction of binding residues for metal ions, nucleic acids, and small molecules.☆32Updated 5 months ago
- ☆20Updated 2 years ago
- PaccMann models for protein language modeling☆42Updated 3 years ago
- ☆86Updated 2 years ago
- Multi-Teacher Distillation for Protein embedding☆11Updated last year
- ☆42Updated 8 months ago