bio-ontology-research-group / deepgoLinks
Function prediction using a deep ontology-aware classifier
☆85Updated 3 years ago
Alternatives and similar repositories for deepgo
Users that are interested in deepgo are comparing it to the libraries listed below
Sorting:
- Interpretation by Deep Generative Masking for Biological Sequences☆37Updated 3 years ago
- ☆49Updated last year
- ☆23Updated 2 years ago
- DeepGO with GOPlus axioms☆98Updated last month
- Machine learning workflows for analyzing high-throughput protein data☆26Updated 9 years ago
- Deep-learning empowered prediction and generation of immunogenic epitopes for T cell immunity☆73Updated 2 years ago
- Protein sequence classification with self-supervised pretraining☆82Updated 4 years ago
- Modelling the Language of Life - Deep Learning Protein Sequences☆75Updated 4 years ago
- Amino Acid Embedding Representation as Machine Learning Features☆20Updated 7 years ago
- A convolutional neural network to predict PPI interactions☆42Updated 7 years ago
- Python package and command line tool for epitope prediction☆52Updated last year
- Official repository for the paper "Large-scale clinical interpretation of genetic variants using evolutionary data and deep learning". Jo…☆66Updated 3 years ago
- insilico Pathway Activation Network Decomposition Analysis (iPANDA) package. Owned by Insilico Medicine Inc. iPANDA is a pathway analysis…☆28Updated 8 years ago
- Bioinformatics 2020: Graph Neural Networks for DNA Sequence Classification☆33Updated 4 years ago
- ☆21Updated 3 years ago
- MHC-peptide class II interaction prediction, binding, presentation☆23Updated 3 years ago
- ☆59Updated 8 years ago
- Modeling of human 5′ UTRs enables the design of new sequences for target levels of translation and 5′ UTR variant prediction.☆53Updated 6 years ago
- Code for the analyses in the human reference interactome paper.☆28Updated 2 years ago
- Assorted tools for interacting with .gct, .gctx files and other Connectivity Map (Broad Institute) data/tools☆136Updated 3 years ago
- PyTorch implementation of bimodal neural networks for drug-cell (pharmarcogenomics) and drug-protein (proteochemometrics) interaction pre…☆54Updated 4 months ago
- Stochastic Sequence Propagation - A Keras Model for optimizing DNA, RNA and protein sequences based on a predictor☆50Updated last year
- RNA Secondary Structure Prediction using an Ensemble of Two-dimensional Deep Neural Networks and Transfer Learning.☆106Updated 6 months ago
- Amino acid embedding and Convolutional Neural Network for HLA Class I-peptide binding prediction☆26Updated 8 years ago
- retrieve protein sequence identifiers and metadata from http://uniprot.org☆68Updated 3 years ago
- Graph-based representation learning method for protein function prediction☆24Updated 3 months ago
- End-to-end deep learning toolkit for predicting protein binding sites and motifs.☆45Updated 6 years ago
- ☆17Updated 3 years ago
- Network-based project to explore gene connectivity through biological scales☆23Updated last year
- A deep learning framework for high-throughput mechanism-driven phenotype screening☆51Updated 4 years ago