bio-ontology-research-group / deepgoLinks
Function prediction using a deep ontology-aware classifier
☆84Updated 2 years ago
Alternatives and similar repositories for deepgo
Users that are interested in deepgo are comparing it to the libraries listed below
Sorting:
- Interpretation by Deep Generative Masking for Biological Sequences☆37Updated 3 years ago
- ☆48Updated 11 months ago
- DeepGO with GOPlus axioms☆97Updated 3 weeks ago
- ☆59Updated 8 years ago
- Official repository for the paper "Large-scale clinical interpretation of genetic variants using evolutionary data and deep learning". Jo…☆65Updated 3 years ago
- Deep-learning empowered prediction and generation of immunogenic epitopes for T cell immunity☆73Updated 2 years ago
- Python package and command line tool for epitope prediction☆52Updated last year
- bpRNA: Large-scale Annotation and Analysis of RNA Secondary Structure☆50Updated last year
- Amino Acid Embedding Representation as Machine Learning Features☆20Updated 7 years ago
- Stochastic Sequence Propagation - A Keras Model for optimizing DNA, RNA and protein sequences based on a predictor☆50Updated last year
- ☆21Updated 3 years ago
- RNA Secondary Structure Prediction using an Ensemble of Two-dimensional Deep Neural Networks and Transfer Learning.☆105Updated 5 months ago
- ☆23Updated 2 years ago
- A convolutional neural network to predict PPI interactions☆42Updated 7 years ago
- MHC-peptide class II interaction prediction, binding, presentation☆23Updated 3 years ago
- Modelling the Language of Life - Deep Learning Protein Sequences☆74Updated 4 years ago
- ☆17Updated 3 years ago
- Machine learning workflows for analyzing high-throughput protein data☆26Updated 8 years ago
- PyTorch implementation of bimodal neural networks for drug-cell (pharmarcogenomics) and drug-protein (proteochemometrics) interaction pre…☆54Updated 3 months ago
- ERGO is a deep learing based model for predicting TCR-peptide binding.☆18Updated 3 years ago
- Modeling of human 5′ UTRs enables the design of new sequences for target levels of translation and 5′ UTR variant prediction.☆53Updated 6 years ago
- A repository for neural representational learning of RNA secondary structures☆32Updated 5 years ago
- A deep learning framework for high-throughput mechanism-driven phenotype screening☆51Updated 4 years ago
- Protein sequence classification with self-supervised pretraining☆82Updated 3 years ago
- insilico Pathway Activation Network Decomposition Analysis (iPANDA) package. Owned by Insilico Medicine Inc. iPANDA is a pathway analysis…☆28Updated 8 years ago
- BigMHC predicts MHC-I (neo)epitope presentation and immunogenicity☆56Updated last year
- Bioinformatics 2020: Graph Neural Networks for DNA Sequence Classification☆33Updated 4 years ago
- Evolutionary velocity with protein language models☆94Updated 2 years ago
- Code for the analyses in the human reference interactome paper.☆28Updated 2 years ago
- Trainable representation analysis study repository☆44Updated 3 years ago