bio-ontology-research-group / deepgoLinks
Function prediction using a deep ontology-aware classifier
☆83Updated 2 years ago
Alternatives and similar repositories for deepgo
Users that are interested in deepgo are comparing it to the libraries listed below
Sorting:
- Graph-based representation learning method for protein function prediction☆24Updated 4 years ago
- Interpretation by Deep Generative Masking for Biological Sequences☆37Updated 3 years ago
- iDeep: integrated prediction of RNA-protein binding sites using deep learning☆39Updated 4 years ago
- ☆47Updated 6 months ago
- Amino Acid Embedding Representation as Machine Learning Features☆19Updated 6 years ago
- Modelling the Language of Life - Deep Learning Protein Sequences☆72Updated 4 years ago
- A repository for neural representational learning of RNA secondary structures☆32Updated 5 years ago
- ☆23Updated 2 years ago
- DeepGO with GOPlus axioms☆94Updated last year
- Official repository for the paper "Large-scale clinical interpretation of genetic variants using evolutionary data and deep learning". Jo…☆66Updated 2 years ago
- End-to-end deep learning toolkit for predicting protein binding sites and motifs.☆45Updated 6 years ago
- Network-based project to explore gene connectivity through biological scales☆23Updated 8 months ago
- retrieve protein sequence identifiers and metadata from http://uniprot.org☆67Updated 3 years ago
- CNN architecture for predicting DNA binding sites for Transcription Factors☆52Updated 6 years ago
- Bioinformatics 2020: Graph Neural Networks for DNA Sequence Classification☆33Updated 4 years ago
- ☆21Updated 2 years ago
- Feature map and function annotation of Proteins☆33Updated last year
- ☆58Updated 7 years ago
- Prediction of binding residues for metal ions, nucleic acids, and small molecules.☆32Updated 6 months ago
- ☆67Updated last year
- Biological Network Integration using Convolutions☆62Updated last year
- Using Transformer protein embeddings with a linear attention mechanism to make SOTA de-novo predictions for the subcellular location of p…☆64Updated last year
- Gene ontology (GO) semantic similarity library for Python☆23Updated 6 years ago
- MHC-peptide class II interaction prediction, binding, presentation☆22Updated 3 years ago
- deep protein solubility prediction☆37Updated 6 years ago
- ☆51Updated 4 years ago
- Orientation of the protein-protein interaction network using network diffusion techniques☆15Updated 4 years ago
- Code associated with "Biophysical prediction of protein-peptide interactions and signaling networks using machine learning."☆70Updated last year
- Transformer-based protein function Annotation with joint feature-Label Embedding☆36Updated 6 months ago
- Code for reproducing results of "Unsupervised embeddings is all you need for protein function prediction"☆39Updated last year