Alternatives and similar repositories for PPIFold

Users that are interested in PPIFold are comparing it to the libraries listed below

• Andre-lab / evodock
  A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking
  ☆29Updated 2 months ago
• data2code / afpdb
  Efficient manipulation of protein structures in Python
  ☆57Updated this week
• swanss / FragFold
  Fragment binding prediction with ColabFold
  ☆37Updated 5 months ago
• 3BioCompBio / pyScoMotif
  Python tool for the discovery of similar 3D structural motifs across protein structures.
  ☆30Updated last year
• KosinskiLab / alphafold3x
  Explicit crosslinks in AlphaFold 3
  ☆22Updated 6 months ago
• silicogenesis / protkit
  A Unified Approach to Protein Engineering
  ☆42Updated last year
• AspirinCode / AlphaPPImd
  Exploring the conformational ensembles of protein-protein complexes with transformer-based generative neural networks
  ☆32Updated last year
• AbSciBio / igdesign
  ☆45Updated 8 months ago
• Wublab / Pythia
  Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations
  ☆66Updated 2 months ago
• dina-lab3D / CombFold
  ☆86Updated 11 months ago
• fteufel / alphafold-peptide-receptors
  Identifying peptide-receptor interactions using AlphaFold-Multimer
  ☆27Updated 2 years ago
• adaptyvbio / competition_metrics
  Metrics for our protein design competitions.
  ☆35Updated 10 months ago
• psipred / Merizo
  Fast and accurate protein domain segmentation using Invariant Point Attention
  ☆41Updated 3 months ago
• KULL-Centre / _2024_cagiada_stability
  ☆71Updated 6 months ago
• coreyhowe999 / RSO
  ☆21Updated 10 months ago
• Kuhlman-Lab / alphafold3
  Kuhlman Lab Installation of AlphaFold3
  ☆30Updated this week
• clami66 / AF_unmasked
  Source code and examples for AlphaFold Unmasked
  ☆73Updated 3 months ago
• LPDI-EPFL / topobuilder
  Parametric Building of de novo Functional Topologies
  ☆44Updated 3 years ago
• labstructbioinf / localpdb
  Python package to manage protein structures and their annotations
  ☆44Updated last year
• bwicky / oligomer_hallucination
  ☆36Updated last year
• tommyhuangthu / EvoEF2
  Physical energy function for protein sequence design
  ☆33Updated 2 years ago
• amyguo1997 / dynamic_protein_design
  Code for deep learning guided design of dynamic proteins
  ☆29Updated last year
• CongLabCode / RoseTTAFold2-PPI
  Fast deep learning methods for large-scale protein-protein interaction screening
  ☆52Updated last month
• Rappsilber-Laboratory / AlphaLink2
  AlphaLink2: Integrating crosslinking MS data into Uni-Fold-Multimer
  ☆57Updated 3 weeks ago
• KULL-Centre / _2022_ML-ddG-Blaabjerg
  ☆52Updated last month
• samuelmurail / af_analysis
  Analysis of alphafold and colabfold results
  ☆31Updated 2 months ago
• haddocking / arctic3d
  Automatic Retrieval and ClusTering of Interfaces in Complexes from 3D structural information
  ☆31Updated last month
• t03i / FlatProt
  A tool for 2D protein visualization aimed at improving the comparability of protein structures through standardized 2D visualizations.
  ☆19Updated last month
• jsunn-y / ALDE
  Active Learning-Assisted Directed Evolution for Protein Engineering
  ☆65Updated 9 months ago
• Kuhlman-Lab / evopro
  ☆87Updated last month