A Heterogeneous Graph Transformer (HGT)-based model for protein function prediction using biological knowledge graphs and protein language models
โ19Jan 27, 2026Updated 8 months ago
Alternatives and similar repositories for ProtHGT
Users that are interested in ProtHGT are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Python Client Library for the G2P Portal APIโ15May 20, 2026Updated 4 months ago
- Rosalution assists researchers study genetic variation ๐งฌ in patients ๐ง๐พโ๐คโ๐ง๐ผ by helping select candidate animal models ๐๐๐ ๐ชฑ to โฆโ10Sep 29, 2026Updated last week
- โ23May 7, 2024Updated 2 years ago
- DeepGO with Fuzzy DLโ34Sep 19, 2022Updated 4 years ago
- PLMAlign utilizes per-residue embeddings as input to obtain specific alignments and more refined similarityโ22Sep 9, 2025Updated last year
- GPU virtual machines on DigitalOcean Gradient AI โข AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- The Agentic BioML Challenge + AutoBioML frameworkโ18Jun 3, 2025Updated last year
- Transformer for protein function prediction (version 2)โ14Aug 31, 2026Updated last month
- ๅบไบQwen2.5ๆจกๅใไฝฟ็จDISC-Law-SFT-Pairๆฐๆฎ้ๅพฎ่ฐ็ๆณๅพๅคงๆจกๅโ11Dec 29, 2024Updated last year
- Simulate patients with rare genetic conditionsโ24Jul 28, 2023Updated 3 years ago
- UAB Research Computing Documentationโ24Sep 25, 2026Updated 2 weeks ago
- โ12Dec 2, 2024Updated last year
- Knowledge graph enhanced LLM for binding affinity predictionโ14Aug 20, 2024Updated 2 years ago
- โ15Jul 25, 2024Updated 2 years ago
- โ53Jun 17, 2026Updated 3 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer โข AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- DeepGO with GOPlus axiomsโ104Oct 1, 2026Updated last week
- The model for edge classification by transforming edges to nodes.โ15Dec 22, 2020Updated 5 years ago
- InterLabelGO+: Unraveling label correlations in protein function predictionโ16Aug 5, 2025Updated last year
- Extract ligand binding sites from PDB. Match the binding sites to de novo scaffolds.โ13Dec 29, 2020Updated 5 years ago
- 'htslib' based 'Duckdb' Extenstion for High Throughput Sequencing File Formatsโ19Updated this week
- vulkan graphic engine for learningโ12Dec 21, 2024Updated last year
- SubPEx (Sub-Pocket Explorer) is a tool to enhance ensemble (multiple-receptor/relaxed-complex) virtual screening. It uses weighted ensembโฆโ18Jun 30, 2025Updated last year
- pylabcontrol: Laboratory Equipment Control for Scientific Experiments.โ12Nov 13, 2023Updated 2 years ago
- Protein Annotation by Residue-Specific Enrichment: a site-based statistical method for interpretable protein function annotationโ16Jun 16, 2025Updated last year
- Deploy on Railway without the complexity - Free Credits Offer โข AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- โ19Jun 27, 2024Updated 2 years ago
- Generate customized voxel representations of protein-ligand complexes using GPU.โ11Sep 8, 2025Updated last year
- This is a GitHub Repository containing the data and code used for a thorough comparison of 11 ligand binding site prediction toolsโ18Nov 19, 2024Updated last year
- FlashFormulaEditor is a formula editor made by Adobe Flex. It is can be used as an online formula editor for a forum, blog etcโ18Nov 19, 2012Updated 13 years ago
- โ15Nov 1, 2017Updated 8 years ago
- A 30+ node flowchart for selecting the right statistical test for evaluating experimental data.โ12Dec 19, 2025Updated 9 months ago
- โ11May 31, 2022Updated 4 years ago
- โ19Oct 14, 2018Updated 7 years ago
- โ13Jul 17, 2025Updated last year
- 1-Click AI Models by DigitalOcean Gradient โข AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- โ20Mar 16, 2025Updated last year
- UPDATE: All future changes will be pushed to https://github.com/HICAI-ZJU/PromptProteinโ15Apr 23, 2023Updated 3 years ago
- cryoID identifies the protein(s) in unknown near-atomic resolution cryoEM density maps from a pool of candidate proteins.โ14Dec 1, 2019Updated 6 years ago
- โ64Oct 1, 2026Updated last week
- Scripts and sources of the block-based reconstruction/refinement in cryo-EMโ16Jul 1, 2026Updated 3 months ago
- โ17Dec 10, 2025Updated 10 months ago
- Epitope Prediction Pipeline and analysis tools built around AlphaFold 2โ21May 9, 2024Updated 2 years ago