tanghaibao / goatoolsLinks
Python library to handle Gene Ontology (GO) terms
☆873Updated 2 months ago
Alternatives and similar repositories for goatools
Users that are interested in goatools are comparing it to the libraries listed below
Sorting:
- Gene Set Enrichment Analysis in Python☆677Updated 2 weeks ago
- python module to plot beautiful and highly customizable genome browser tracks☆851Updated last year
- Python interface to access reference genome features (such as genes, transcripts, and exons) from Ensembl☆397Updated 3 months ago
- A Python implementation of the DESeq2 pipeline for bulk RNA-seq DEA.☆709Updated last week
- Tools to process and analyze deep sequencing data.☆746Updated 4 months ago
- Efficient pythonic random access to fasta subsequences☆478Updated 3 months ago
- Bioinformatics code libraries and scripts☆551Updated 4 months ago
- Automatically exported from code.google.com/p/cdhit☆709Updated 3 years ago
- Scripts to download genomes from the NCBI FTP servers☆1,051Updated 4 months ago
- Performant Pythonic GenomicRanges☆491Updated last month
- Fast genome-wide functional annotation through orthology assignment☆677Updated 5 months ago
- A deep learning-based tool to identify splice variants☆474Updated 4 months ago
- Python library to plot DNA sequence features (e.g. from Genbank files)☆662Updated 5 months ago
- A tool to find sequencing data and metadata from public databases.☆591Updated last year
- A list of interesting genome browser and genome visualization programs☆1,032Updated 3 weeks ago
- Analysis of deep sequencing data for rapid and intuitive interpretation of genome editing experiments☆327Updated this week
- bedtools - the swiss army knife for genome arithmetic☆1,011Updated 8 months ago
- A list of useful bioinformatics resources☆618Updated 7 months ago
- A collection of tools for Hi-C data analysis☆626Updated last month
- Phylogenetic orthology inference for comparative genomics☆819Updated 4 months ago
- List of software packages for multi-omics analysis☆880Updated last month
- Python library to facilitate genome assembly, annotation, and comparative genomics☆878Updated last week
- RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.☆1,163Updated this week
- Pysam is a Python package for reading, manipulating, and writing genomics data such as SAM/BAM/CRAM and VCF/BCF files. It's a lightweight…☆870Updated 2 weeks ago
- Access to Biological Web Services from Python.☆324Updated this week
- Toolkit for processing sequences in FASTA/Q formats☆1,515Updated 6 months ago
- Tools for handling Unique Molecular Identifiers in NGS data sets☆533Updated 5 months ago
- The ViennaRNA Package☆374Updated this week
- Graph-based alignment (Hierarchical Graph FM index)☆520Updated 3 months ago
- A curated list of resources for learning bioinformatics.☆499Updated 3 years ago