cansyl / DEEPredLinks
☆25Updated 3 years ago
Alternatives and similar repositories for DEEPred
Users that are interested in DEEPred are comparing it to the libraries listed below
Sorting:
- ☆46Updated 6 months ago
- Function prediction using a deep ontology-aware classifier☆83Updated 2 years ago
- Modelling the Language of Life - Deep Learning Protein Sequences☆72Updated 4 years ago
- Using Transformer protein embeddings with a linear attention mechanism to make SOTA de-novo predictions for the subcellular location of p…☆63Updated last year
- Graph-based representation learning method for protein function prediction☆24Updated 4 years ago
- A Python package for extracting protein sequence features☆59Updated 2 years ago
- Evolutionary velocity with protein language models☆90Updated last year
- bpRNA: Large-scale Annotation and Analysis of RNA Secondary Structure☆48Updated last year
- A repository for neural representational learning of RNA secondary structures☆32Updated 5 years ago
- ☆131Updated 2 years ago
- End-to-end deep learning toolkit for predicting protein binding sites and motifs.☆45Updated 6 years ago
- Prediction of binding residues for metal ions, nucleic acids, and small molecules.☆32Updated 5 months ago
- Bioinformatics 2020: Graph Neural Networks for DNA Sequence Classification☆33Updated 4 years ago
- NLP for Proteins - A paper collection☆13Updated 4 years ago
- Draw RNA secondary structures in python.☆48Updated 9 months ago
- ScanFold is an RNA sequence scanning pipeline which attempts to identify potentially functional RNA secondary structures. This is done by…☆19Updated 2 years ago
- Diverse Genomic Embedding Benchmark☆45Updated 2 months ago
- Protein sequence classification with self-supervised pretraining☆82Updated 3 years ago
- DistilProtBert implementation, a distilled version of ProtBert model.☆15Updated 2 years ago
- Code for reproducing results of "Unsupervised embeddings is all you need for protein function prediction"☆39Updated last year
- De novo protein structure prediction using iteratively predicted structural constraints☆57Updated 3 years ago
- ☆74Updated last year
- Multi-class signal peptide prediction and structure decoding model.☆84Updated 4 months ago
- Code associated with "Biophysical prediction of protein-peptide interactions and signaling networks using machine learning."☆70Updated last year
- DeepGO with Fuzzy DL☆30Updated 2 years ago
- Machine learning workflows for analyzing high-throughput protein data☆26Updated 8 years ago
- insilico Pathway Activation Network Decomposition Analysis (iPANDA) package. Owned by Insilico Medicine Inc. iPANDA is a pathway analysis…☆25Updated 8 years ago
- Official repository for the paper "Large-scale clinical interpretation of genetic variants using evolutionary data and deep learning". Jo…☆66Updated 2 years ago
- PaccMann models for protein language modeling☆42Updated 3 years ago
- A software package for computing features of peptides and proteins☆60Updated 11 months ago