bio-ontology-research-group / deepgozero
DeepGO with Fuzzy DL
☆29Updated 2 years ago
Alternatives and similar repositories for deepgozero:
Users that are interested in deepgozero are comparing it to the libraries listed below
- Fast and accurate protein function prediction from sequence through pretrained language model and homology-based label diffusion☆38Updated 6 months ago
- ☆20Updated 11 months ago
- Protein language model trained on coding DNA☆46Updated 4 months ago
- Using Transformer protein embeddings with a linear attention mechanism to make SOTA de-novo predictions for the subcellular location of p…☆60Updated last year
- Alignment-free structure prediction using protein language models☆22Updated 2 years ago
- GraphSite: protein-DNA binding site prediction using graph transformer and predicted protein structures☆60Updated 6 months ago
- ☆33Updated last month
- RiboNucleic Acid (RNA) Language Model☆83Updated 3 months ago
- ☆35Updated 5 months ago
- HoTS: Sequence-based prediction of binding regions and drug-target interactions.☆26Updated 2 years ago
- iFeatureOmega is a comprehensive platform for generating, analyzing and visualizing more than 170 representations for biological sequence…☆29Updated last year
- Nature Computational Science: Unbiased organism-agnostic and highly sensitive signal peptide predictor with deep protein language model☆29Updated 2 months ago
- ☆44Updated 2 months ago
- Prediction of binding residues for metal ions, nucleic acids, and small molecules.☆32Updated 2 months ago
- ☆65Updated 4 months ago
- ProtFeat is protein feature extraction tool that utilizes POSSUM and iFeature.☆19Updated 5 months ago
- DeepAAI☆30Updated last month
- contrastive learning and pre-trained encoder for protein-ligand binding sites prediction☆26Updated last month
- An unofficial re-implementation of AntiBERTy, an antibody-specific protein language model, in PyTorch.☆24Updated 11 months ago
- A Python Tool for Benchmarking Ontological Classification Methods☆37Updated 9 months ago
- ☆108Updated 2 years ago
- Inference code for PoET: A generative model of protein families as sequences-of-sequences☆61Updated 9 months ago
- A repository for neural representational learning of RNA secondary structures☆31Updated 5 years ago
- SPECTRA: Spectral framework for evaluation of biomedical AI models☆37Updated 3 weeks ago
- PLM based active learning model for protein engineering☆72Updated 6 months ago
- Antibody Annotation - Annotate VH and VL sequences (FR and CDR) in Python☆29Updated last year
- Fast deep learning methods for large-scale protein-protein interaction screening☆34Updated 4 months ago
- ☆104Updated last year
- Public repository describing training and testing of AntiBERTa.☆57Updated last year
- DeepGraphGO: graph neural network for large-scale, multispecies protein function prediction☆34Updated 3 years ago