biomed-AI / SPROF-GO
Fast and accurate protein function prediction from sequence through pretrained language model and homology-based label diffusion
☆38Updated 6 months ago
Alternatives and similar repositories for SPROF-GO:
Users that are interested in SPROF-GO are comparing it to the libraries listed below
- DeepGO with Fuzzy DL☆29Updated 2 years ago
- GraphSite: protein-DNA binding site prediction using graph transformer and predicted protein structures☆60Updated 6 months ago
- Protein language model trained on coding DNA☆46Updated 4 months ago
- Generating and scoring novel enzyme sequences with a variety of models and metrics☆69Updated last month
- ☆104Updated last year
- Enzyme Activity Prediction of Sequence Variants onNovel Substrates using Improved Substrate Encodings and Convolutional Pooling☆17Updated 2 years ago
- ☆65Updated 4 months ago
- ☆28Updated 2 months ago
- ☆35Updated 5 months ago
- open source code for Tencent tFold☆81Updated 3 weeks ago
- An unofficial re-implementation of AntiBERTy, an antibody-specific protein language model, in PyTorch.☆24Updated 11 months ago
- Active Learning-Assisted Directed Evolution for Protein Engineering☆37Updated 3 months ago
- A Python 3 version of the protein descriptor package propy☆40Updated 2 years ago
- Deep learning framework for protein sequence design from a backbone scaffold that can leverage the molecular context including non-protei…☆36Updated 2 months ago
- Tool for modelling the CDRs of antibodies☆47Updated 2 years ago
- An open-source deep learning framework for data mining of protein-protein interfaces or single-residue variants.☆44Updated 2 months ago
- A dataset for training and benchmarking deep learning models for RNA structure prediction☆45Updated 2 months ago
- ☆37Updated last year
- Zero-shot prediction of mutation effects on protein function with multimodal deep representation learning☆50Updated 8 months ago
- ☆59Updated 3 years ago
- ☆31Updated 5 months ago
- ☆68Updated 4 years ago
- TemStaPro - a program for protein thermostability prediction using sequence representations from a protein language model.☆50Updated 10 months ago
- ☆49Updated 8 months ago
- 🧬 Fusion of protein sequence and structural information, using denoising pre-training network for zero-shot protein engineering (eLife 2…☆53Updated last month
- ☆22Updated 3 months ago
- Gibbs sampling for generating protein sequences☆54Updated last month
- Nucleic Acids Research 2024：RNA-MSM model is an unsupervised RNA language model based on multiple sequences that outputs both embedding a…☆55Updated 7 months ago
- Data repository for "Fine-tuning protein language models boosts predictions across diverse tasks"☆34Updated 5 months ago
- Fast and accurate protein domain segmentation using Invariant Point Attention☆33Updated 2 months ago