tomiilab / DeepECALinks
☆18Updated 5 years ago
Alternatives and similar repositories for DeepECA
Users that are interested in DeepECA are comparing it to the libraries listed below
Sorting:
- Fully convolutional neural networks for protein residue-residue contact prediction☆43Updated 6 years ago
- PDNET: A fully open-source framework for deep learning protein real-valued distances☆35Updated 4 years ago
- DeepContact Software☆26Updated 7 years ago
- Code associated with "Biophysical prediction of protein-peptide interactions and signaling networks using machine learning."☆72Updated last year
- Paratope Prediction using Deep Learning☆60Updated 2 years ago
- Prediction of binding residues for metal ions, nucleic acids, and small molecules.☆32Updated 7 months ago
- deep protein solubility prediction☆38Updated 6 years ago
- Preforms De novo protein design using machine learning and PyRosetta to generate a novel protein structure☆52Updated 4 months ago
- The standalone version of SPOT-1D-Single available for public use for research purposes.☆23Updated last year
- Python package for peptide sequence generation, peptide descriptor calculation and sequence analysis.☆61Updated 4 months ago
- ☆29Updated 5 years ago
- ResPRE is an algorithm for protein residue-residue contact-map prediction☆21Updated 6 years ago
- De novo protein structure prediction using iteratively predicted structural constraints☆58Updated 3 years ago
- Neural networks for deep mutational scanning data☆69Updated last month
- This repository contains the stand-alone tool for MusiteDeep server☆34Updated 4 years ago
- Fast and easy contact prediction.☆38Updated last year
- A Python 3 version of the protein descriptor package propy☆42Updated 2 years ago
- Multi-Channel Deep Chemogenomic Modeling of Receptor-Ligand Binding Affinity Prediction for Drug Discovery☆28Updated 4 years ago
- DeepDom is an ab-initio method for protein domain boundary prediction☆15Updated 2 years ago
- Protein sequence classification with self-supervised pretraining☆82Updated 3 years ago
- RaptorX-Property: a Standalone Package for Protein Structure Property Prediction☆17Updated 6 years ago
- HoTS: Sequence-based prediction of binding regions and drug-target interactions.☆26Updated 2 years ago
- Machine Learning Designs Non-Hemolytic Antimicrobial Peptides☆35Updated 4 years ago
- Code and data to reproduce analyses in Biswas et al. (2020) "Low-N protein engineering with data-efficient deep learning".☆59Updated 4 years ago
- Learning Protein Constitutive Motifs from Sequence Data: RBM toolbox☆20Updated 6 years ago
- ☆25Updated last year
- GraphSite: protein-DNA binding site prediction using graph transformer and predicted protein structures☆60Updated 11 months ago
- Pytorch implementation of BionoiNet, which is a deep learning-based software to classify ligand-binding sites.☆20Updated 4 years ago
- Parameter-efficient embeddings for proteins, pretrained using a contrastive loss.☆29Updated 4 years ago
- A complete, open-source, end-to-end re-implementation of the Church Lab's low-N eUniRep in silico protein engineering pipeline presented …☆27Updated 4 years ago