Alternatives and similar repositories for DeepECA

Users that are interested in DeepECA are comparing it to the libraries listed below

• psipred / DeepCov
  Fully convolutional neural networks for protein residue-residue contact prediction
  ☆43Updated 6 years ago
• ElofssonLab / PconsC4
  Fast and easy contact prediction.
  ☆38Updated last year
• largelymfs / deepcontact
  DeepContact Software
  ☆26Updated 7 years ago
• ba-lab / pdnet
  PDNET: A fully open-source framework for deep learning protein real-valued distances
  ☆36Updated 4 years ago
• psipred / DMPfold
  De novo protein structure prediction using iteratively predicted structural constraints
  ☆58Updated 3 years ago
• aqlaboratory / hsm
  Code associated with "Biophysical prediction of protein-peptide interactions and signaling networks using machine learning."
  ☆70Updated last year
• cansyl / MDeePred
  Multi-Channel Deep Chemogenomic Modeling of Receptor-Ligand Binding Affinity Prediction for Drug Discovery
  ☆28Updated 4 years ago
• GIST-CSBL / HoTS
  HoTS: Sequence-based prediction of binding regions and drug-target interactions.
  ☆26Updated 2 years ago
• sarisabban / RamaNet
  Preforms De novo protein design using machine learning and PyRosetta to generate a novel protein structure
  ☆52Updated 5 months ago
• eliberis / parapred
  Paratope Prediction using Deep Learning
  ☆60Updated 2 years ago
• ElwynWang / DeepFragLib
  ☆29Updated 5 years ago
• Graylab / deepH3-distances-orientations
  ☆35Updated 3 years ago
• dohlee / antiberty-pytorch
  An unofficial re-implementation of AntiBERTy, an antibody-specific protein language model, in PyTorch.
  ☆25Updated last year
• PaccMann / paccmann_proteomics
  PaccMann models for protein language modeling
  ☆42Updated 3 years ago
• leeyang / ResPRE
  ResPRE is an algorithm for protein residue-residue contact-map prediction
  ☆21Updated 6 years ago
• Rostlab / bindPredict
  Prediction of binding residues for metal ions, nucleic acids, and small molecules.
  ☆32Updated 7 months ago
• alexarnimueller / modlAMP
  Python package for peptide sequence generation, peptide descriptor calculation and sequence analysis.
  ☆61Updated 4 months ago
• MartinThoma / propy3
  A Python 3 version of the protein descriptor package propy
  ☆43Updated 2 years ago
• psipred / FFPredGAN
  Improving protein function prediction with synthetic feature samples created by generative adversarial networks
  ☆22Updated 4 years ago
• realbigws / RaptorX_Property_Fast
  RaptorX-Property: a Standalone Package for Protein Structure Property Prediction
  ☆17Updated 6 years ago
• sameerkhurana10 / DSOL_rv0.2
  deep protein solubility prediction
  ☆39Updated 6 years ago
• yfCuiFaith / DeepCSeqSite
  Protein-ligand binding sites prediction toolkits
  ☆21Updated 6 years ago
• jertubiana / ProteinMotifRBM
  Learning Protein Constitutive Motifs from Sequence Data: RBM toolbox
  ☆20Updated 6 years ago
• BioComputingUP / CAID
  Critical Assessment of Intrinsic Disorder
  ☆14Updated 3 weeks ago
• gf712 / AbPyTools
  Python package for analysis of antibody heavy and light chains
  ☆25Updated 4 years ago
• stemylonas / DeepSurf
  A surface-based deep learning approach for the prediction of ligand binding sites on proteins
  ☆44Updated 2 years ago
• xinyu-dev / annotate_v
  Antibody Annotation - Annotate VH and VL sequences (FR and CDR) in Python
  ☆30Updated 2 years ago
• Faezov / PDBrenum
  ☆30Updated 2 months ago
• reymond-group / MLpeptide
  Machine Learning Designs Non-Hemolytic Antimicrobial Peptides
  ☆35Updated 4 years ago
• Furman-Lab / Peptide_docking_with_AF2_and_RosettAfold
  Code and data used in https://doi.org/10.1101/2021.08.01.454656
  ☆53Updated 3 years ago