DeepGraphGO: graph neural network for large-scale, multispecies protein function prediction
☆35Jul 28, 2021Updated 5 years ago
Alternatives and similar repositories for DeepGraphGO
Users that are interested in DeepGraphGO are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Transformer-based protein function Annotation with joint feature-Label Embedding☆38Dec 18, 2024Updated last year
- The implementation of paper "HPOFiller: identifying missing protein-phenotype associations by graph convolutional network".☆12Dec 24, 2020Updated 5 years ago
- DeepGO with GOPlus axioms☆104Oct 1, 2026Updated last week
- Method for constructing embeddings of GO terms.☆14Nov 25, 2021Updated 4 years ago
- ☆18Jun 13, 2025Updated last year
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆57Aug 28, 2024Updated 2 years ago
- DeepGO with Fuzzy DL☆34Sep 19, 2022Updated 4 years ago
- An official implementation of Protein Representation Learning via Knowledge Enhanced Primary Structure Reasoning☆28Jul 14, 2023Updated 3 years ago
- Fast and accurate protein function prediction from sequence through pretrained language model and homology-based label diffusion☆45Jul 27, 2024Updated 2 years ago
- ☆17Apr 1, 2023Updated 3 years ago
- ☆64Oct 1, 2026Updated last week
- ☆22Mar 6, 2024Updated 2 years ago
- ☆13Nov 12, 2021Updated 4 years ago
- Function prediction using a deep ontology-aware classifier☆87Oct 1, 2026Updated last week
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Graph Learning of INTER-protein contacts☆11Feb 20, 2022Updated 4 years ago
- ☆25Sep 22, 2026Updated 2 weeks ago
- ☆76Sep 25, 2024Updated 2 years ago
- ML toolset for creating TED: The Encyclopedia of Domains☆29May 29, 2025Updated last year
- Graph-based representation learning method for protein function prediction☆24Aug 25, 2025Updated last year
- ☆23Sep 14, 2023Updated 3 years ago
- Transformer for protein function prediction (version 2)☆14Aug 31, 2026Updated last month
- A case study on Pfam dataset to classify protein families.☆32Oct 10, 2019Updated 7 years ago
- Sequence-based protein solubility prediction using multidimensional embedding☆13Apr 19, 2021Updated 5 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- S2F: protein function without experiments☆15Nov 24, 2025Updated 10 months ago
- PO2Vec: bidirectional partial-order embeddings encode the GO hierarchy, enabling one-shot extreme multi-label function classification.☆48Mar 17, 2025Updated last year
- Protein Annotation by Residue-Specific Enrichment: a site-based statistical method for interpretable protein function annotation☆16Jun 16, 2025Updated last year
- ☆13Oct 19, 2023Updated 2 years ago
- ☆50Dec 2, 2024Updated last year
- The standalone version / cli-tool of SPOT-Contact-Single available for public use for research purposes.☆16Feb 1, 2024Updated 2 years ago
- Deep functional residue identification☆356Mar 24, 2023Updated 3 years ago
- Protein-protein interacting site predictor using deep graph convolutional network☆11Jan 3, 2023Updated 3 years ago
- catELMo: Context-Aware Amino Acid Embedding Advances Analysis of TCR-Epitope Interactions☆15Apr 10, 2025Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Geometric Vector Perceptron --- a rotation-equivariant GNN for learning from biomolecular structure☆164May 1, 2021Updated 5 years ago
- Reasoner for the description logic EL+.☆17Sep 28, 2026Updated last week
- Insights into the inner workings of transformer models for protein function prediction☆14Feb 9, 2024Updated 2 years ago
- Codes and models for the paper "Learning Unknown from Correlations: Graph Neural Network for Inter-novel-protein Interaction Prediction".☆82Feb 8, 2022Updated 4 years ago
- DeepCrystal: A Deep Learning Framework for sequence-based Protein Crystallization Prediction☆19Oct 2, 2025Updated last year
- Precision-Recall based assessment for CAFA☆16Dec 6, 2019Updated 6 years ago
- LM-GVP: A Generalizable Deep Learning Framework for Protein Property Prediction from Sequence and Structure☆67Mar 4, 2024Updated 2 years ago