Alternatives and similar repositories for FFPredGAN

Users that are interested in FFPredGAN are comparing it to the libraries listed below

• xinyu-dev / annotate_v
  Antibody Annotation - Annotate VH and VL sequences (FR and CDR) in Python
  ☆30Updated 2 years ago
• jertubiana / ProteinMotifRBM
  Learning Protein Constitutive Motifs from Sequence Data: RBM toolbox
  ☆20Updated 6 years ago
• eliberis / parapred
  Paratope Prediction using Deep Learning
  ☆60Updated 2 years ago
• alexarnimueller / modlAMP
  Python package for peptide sequence generation, peptide descriptor calculation and sequence analysis.
  ☆61Updated 4 months ago
• zswitten / Antimicrobial-Peptides
  Collecting AMP MIC data from different sources, then running a GAN to output promising sequences
  ☆81Updated last year
• churchlab / low-N-protein-engineering
  Code and data to reproduce analyses in Biswas et al. (2020) "Low-N protein engineering with data-efficient deep learning".
  ☆60Updated 4 years ago
• jas-preet / SPOT-1D-Single
  The standalone version of SPOT-1D-Single available for public use for research purposes.
  ☆23Updated last year
• xzenglab / TAGPPI
  ☆20Updated 2 years ago
• biomed-AI / GraphSite
  GraphSite: protein-DNA binding site prediction using graph transformer and predicted protein structures
  ☆60Updated last year
• gv20-therapeutics / antibody-in-pytorch
  Machine learning models for antibody sequences in PyTorch
  ☆40Updated 4 years ago
• psipred / protein-vae
  Variational autoencoder for protein sequences - add metal binding sites and generate sequences for novel topologies
  ☆87Updated 2 years ago
• alexarnimueller / LSTM_peptides
  Long short-term memory recurrent neural networks for learning peptide and protein sequences to later design new, similar examples.
  ☆76Updated 2 years ago
• Wang-Lin-boop / GetPDB
  Download pdb/protein structures using Uniprot id; This script will download related PDB files, extract chains(Optional), remove duplicate…
  ☆42Updated last year
• sarisabban / RamaNet
  Preforms De novo protein design using machine learning and PyRosetta to generate a novel protein structure
  ☆52Updated 5 months ago
• sameerkhurana10 / DSOL_rv0.2
  deep protein solubility prediction
  ☆39Updated 6 years ago
• biomed-AI / GPSite
  Geometry-aware protein binding site predictor
  ☆20Updated 11 months ago
• duolinwang / MusiteDeep_web
  This repository contains the stand-alone tool for MusiteDeep server
  ☆34Updated 4 years ago
• nstrodt / UDSMProt
  Protein sequence classification with self-supervised pretraining
  ☆82Updated 3 years ago
• yanzhanglab / Graph2GO
  Graph-based representation learning method for protein function prediction
  ☆24Updated 5 years ago
• PaccMann / paccmann_proteomics
  PaccMann models for protein language modeling
  ☆42Updated 3 years ago
• aqlaboratory / hsm
  Code associated with "Biophysical prediction of protein-peptide interactions and signaling networks using machine learning."
  ☆70Updated last year
• GreiffLab / manuscript_ab_epitope_interaction
  ☆25Updated last year
• av1659 / fbgan
  ☆56Updated 6 years ago
• Rostlab / EAT
  Embedding-based annotation transfer (EAT) uses Euclidean distance between vector representations (embeddings) of proteins to transfer ann…
  ☆37Updated 6 months ago
• leandroradusky / pyfoldx
  pyFoldX: python bindings for FoldX.
  ☆48Updated 3 years ago
• lucian-ilie / DELPHI
  Deep learning protein-protein binding sites prediction
  ☆20Updated 2 years ago
• ivanjayapurna / low-n-protein-engineering
  A complete, open-source, end-to-end re-implementation of the Church Lab's low-N eUniRep in silico protein engineering pipeline presented …
  ☆27Updated 5 years ago
• csi-greifflab / manuscript_insilico_antibody_generation
  ☆23Updated 4 years ago
• ProteinDesignLab / protein_seq_des
  Code for our paper "Protein sequence design with a learned potential"
  ☆79Updated last year
• alex-hh / deep-protein-generation
  ☆58Updated 2 years ago