yanzhanglab / Graph2GOLinks
Graph-based representation learning method for protein function prediction
☆24Updated 3 weeks ago
Alternatives and similar repositories for Graph2GO
Users that are interested in Graph2GO are comparing it to the libraries listed below
Sorting:
- Feature map and function annotation of Proteins☆33Updated last year
- Trainable representation analysis study repository☆44Updated 3 years ago
- ☆48Updated 9 months ago
- Nature Biotechnology: Ultra-fast, sensitive detection of protein remote homologs using deep dense retrieval☆119Updated last year
- Struct2GO:protein function prediction based on Graph pooling algorithm and AlphaFold2 structure information☆27Updated last year
- ☆20Updated last year
- Alignment-free structure prediction using protein language models☆22Updated 2 years ago
- Prediction of binding residues for metal ions, nucleic acids, and small molecules.☆33Updated 2 weeks ago
- ☆25Updated last year
- DeepECtransformer☆28Updated last year
- GraphPart, a data partitioning method for ML on biological sequences☆30Updated last year
- Evolutionary velocity with protein language models☆94Updated last year
- Next generation sequence parameter library for proteins☆35Updated this week
- Long disorder consensus predictor☆17Updated 2 weeks ago
- Prediction of B-cell epitopes from amino acid sequences using deep neural networks.☆17Updated 3 years ago
- Embedding-based annotation transfer (EAT) uses Euclidean distance between vector representations (embeddings) of proteins to transfer ann…☆37Updated 3 weeks ago
- Transformer-based protein function Annotation with joint feature-Label Embedding☆35Updated 9 months ago
- Protein language model trained on coding DNA☆49Updated 11 months ago
- Antibody Annotation - Annotate VH and VL sequences (FR and CDR) in Python☆30Updated 2 years ago
- Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning☆90Updated last year
- Python code to color a PDB structure based on parameters from a multiple sequence alignment☆32Updated 2 years ago
- ☆36Updated 8 months ago
- Code and data to reproduce analyses in Biswas et al. (2020) "Low-N protein engineering with data-efficient deep learning".☆59Updated 4 years ago
- Detection of remote homology by comparison of protein language model representations☆55Updated 9 months ago
- ☆68Updated 11 months ago
- ☆21Updated 2 years ago
- Mutation effects predicted from sequence co-variation☆69Updated 8 years ago
- Fast protein domain structure embedding+search tool☆26Updated 3 months ago
- Repository for Protein-Vec, a protein embedding mixture of experts model☆38Updated last year
- iFeatureOmega is a comprehensive platform for generating, analyzing and visualizing more than 170 representations for biological sequence…☆34Updated 2 years ago