Graph-based representation learning method for protein function prediction
☆24Aug 25, 2025Updated 8 months ago
Alternatives and similar repositories for Graph2GO
Users that are interested in Graph2GO are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A Deep Learning Model for Protein Function Prediction☆18Jul 31, 2020Updated 5 years ago
- Improving protein function prediction with synthetic feature samples created by generative adversarial networks☆22Oct 6, 2020Updated 5 years ago
- [Briefings in Bioinformatics'20] Integrating multi-network topology for gene function prediction using deep neural networks☆14Sep 5, 2019Updated 6 years ago
- Code for reproducing results of "Unsupervised embeddings is all you need for protein function prediction"☆41Jul 6, 2023Updated 2 years ago
- NLP for Proteins - A paper collection☆13Sep 10, 2020Updated 5 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Function prediction using a deep ontology-aware classifier☆87Nov 21, 2022Updated 3 years ago
- This repository contains all DeepCLIP Python code☆11May 30, 2024Updated last year
- A deep learning framework for deubiquitnase-substrate interaction identification☆12Jul 31, 2025Updated 9 months ago
- DeepGraphGO: graph neural network for large-scale, multispecies protein function prediction☆35Jul 28, 2021Updated 4 years ago
- Protein orthologous group assignment with deep learning☆30Dec 16, 2025Updated 4 months ago
- Computes a molecular graph for protein structures.☆59Apr 27, 2026Updated last week
- ARCHIVED: this has been folded into the owlapi☆11Oct 27, 2020Updated 5 years ago
- DeepGO with GOPlus axioms☆103Oct 23, 2025Updated 6 months ago
- MetaProFi is a bloom filter based tool for storing and querying sequence data for accurate identification of functionally relevant geneti…☆13Apr 14, 2022Updated 4 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Learning Neural Generative Dynamics for Molecular Conformation Generation (ICLR 2021)☆22Sep 20, 2021Updated 4 years ago
- ☆57Apr 26, 2019Updated 7 years ago
- A browser extension and web application for extracting gene sets from GEO and piping them to Enrichr.☆14May 1, 2023Updated 3 years ago
- Protein generative model conditioned on Gene Ontology terms☆34Jul 17, 2022Updated 3 years ago
- ☆25Apr 27, 2022Updated 4 years ago
- Emap2sec is a computational tool to identify protein secondary structures☆16Jul 31, 2024Updated last year
- ☆19Sep 20, 2020Updated 5 years ago
- Nextflow pipeline for the computation of structure-based MSAs with AlphaFold2 models☆12Dec 20, 2022Updated 3 years ago
- ☆21Feb 22, 2024Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆12Jul 31, 2020Updated 5 years ago
- Augmenting a training dataset of the generative diffusion model for molecular docking with artificial binding pockets☆10Aug 5, 2025Updated 9 months ago
- ☆15Dec 4, 2023Updated 2 years ago
- Code for the paper "Generating and designing DNA with deep generative models" (arXiv:1712.06148)☆42Apr 14, 2018Updated 8 years ago
- AbLang: A language model for antibodies☆17Sep 22, 2023Updated 2 years ago
- Water Network-Augmented Two-State model for Protein−Ligand Binding Affinity Prediction☆12Jun 10, 2023Updated 2 years ago
- A set of scripts to help automate the construction of data sets for multi-gene phylogenetic analyses.☆13Mar 13, 2019Updated 7 years ago
- Implementation of Accurate Protein Structure Prediction by Embeddings and Deep Learning Representations☆24Feb 20, 2020Updated 6 years ago
- Colab notebooks exploring different Machine Learning topics.☆16Apr 2, 2022Updated 4 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- quincunx: an R package to query, download and wrangle PGS Catalog data☆15Aug 14, 2022Updated 3 years ago
- Disease Gene Prioritization with Privileged Information and Heteroscedastic Dropout☆11Jan 28, 2021Updated 5 years ago
- Alignment-free structure prediction using protein language models☆22Nov 2, 2022Updated 3 years ago
- Simple and efficient access to genomic data for deep learning models.☆42Jan 9, 2020Updated 6 years ago
- ☆93Sep 7, 2022Updated 3 years ago
- ☆12Jan 31, 2023Updated 3 years ago
- Learning Tree structures and Tree metrics☆24Aug 8, 2024Updated last year