yanzhanglab / Graph2GOLinks
Graph-based representation learning method for protein function prediction
☆24Updated 4 years ago
Alternatives and similar repositories for Graph2GO
Users that are interested in Graph2GO are comparing it to the libraries listed below
Sorting:
- Feature map and function annotation of Proteins☆33Updated last year
- DeepECtransformer☆26Updated last year
- ☆21Updated 2 years ago
- ☆18Updated last year
- ☆37Updated 5 months ago
- ☆26Updated last year
- Antibody Annotation - Annotate VH and VL sequences (FR and CDR) in Python☆30Updated 2 years ago
- ☆68Updated 9 months ago
- Prediction of binding residues for metal ions, nucleic acids, and small molecules.☆32Updated 6 months ago
- CodonBert: a BERT-based architecture tailored for codon optimization using the cross-attention mechanism.☆38Updated 9 months ago
- [Nat. Commun.] Code for paper 'Attention-based multi-label neural networks for integrated prediction and interpretation of twelve widely …☆30Updated 3 years ago
- GraphPart, a data partitioning method for ML on biological sequences☆28Updated last year
- Accurate prediction of protein intrinsic disorder and its functions using graph-based interaction protein language model☆21Updated 10 months ago
- Protein language model trained on coding DNA☆47Updated 8 months ago
- Trainable representation analysis study repository☆43Updated 3 years ago
- ☆47Updated 6 months ago
- A domain parser for Alphafold models☆38Updated last year
- The code used to generate the results from Parkinson / Hard et al. 2022☆17Updated last month
- Fast protein domain structure embedding+search tool☆21Updated last month
- ProNA2020: System predicting protein-DNA, protein-RNA and protein-protein binding sites from sequence☆14Updated 4 years ago
- GTalign, HPC protein structure alignment, superposition and search (alpha release)☆45Updated 2 weeks ago
- Dual-core Multi-agent Learning Framework For EC Number Prediction☆19Updated 7 months ago
- Embedding-based annotation transfer (EAT) uses Euclidean distance between vector representations (embeddings) of proteins to transfer ann…☆36Updated 5 months ago
- ☆30Updated last year
- iFeatureOmega is a comprehensive platform for generating, analyzing and visualizing more than 170 representations for biological sequence…☆32Updated last year
- HoTS: Sequence-based prediction of binding regions and drug-target interactions.☆26Updated 2 years ago
- Nature Biotechnology: Ultra-fast, sensitive detection of protein remote homologs using deep dense retrieval☆112Updated 9 months ago
- Code for generating model and predictions for CAFA5 competition 2023 (4th place solution)☆13Updated last year
- ☆19Updated 4 years ago
- Repository for Protein-Vec, a protein embedding mixture of experts model☆38Updated last year