yanzhanglab / Graph2GOLinks
Graph-based representation learning method for protein function prediction
☆24Updated last week
Alternatives and similar repositories for Graph2GO
Users that are interested in Graph2GO are comparing it to the libraries listed below
Sorting:
- Feature map and function annotation of Proteins☆33Updated last year
- ☆48Updated 8 months ago
- DeepECtransformer☆26Updated last year
- Long disorder consensus predictor☆16Updated 5 months ago
- Embedding-based annotation transfer (EAT) uses Euclidean distance between vector representations (embeddings) of proteins to transfer ann…☆37Updated 7 months ago
- ☆25Updated last year
- ☆21Updated 2 years ago
- Alignment-free structure prediction using protein language models☆22Updated 2 years ago
- Antibody Annotation - Annotate VH and VL sequences (FR and CDR) in Python☆30Updated 2 years ago
- Trainable representation analysis study repository☆44Updated 3 years ago
- Prediction of binding residues for metal ions, nucleic acids, and small molecules.☆32Updated 8 months ago
- Code and data to reproduce analyses in Biswas et al. (2020) "Low-N protein engineering with data-efficient deep learning".☆59Updated 4 years ago
- Python package for peptide sequence generation, peptide descriptor calculation and sequence analysis.☆62Updated 5 months ago
- Evolutionary velocity with protein language models☆94Updated last year
- Prediction of B-cell epitopes from amino acid sequences using deep neural networks.☆17Updated 2 years ago
- iFeatureOmega is a comprehensive platform for generating, analyzing and visualizing more than 170 representations for biological sequence…☆34Updated 2 years ago
- ☆21Updated last year
- MHC-peptide class II interaction prediction, binding, presentation☆23Updated 3 years ago
- Struct2GO:protein function prediction based on Graph pooling algorithm and AlphaFold2 structure information☆27Updated last year
- Protein language model trained on coding DNA☆49Updated 10 months ago
- Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning☆91Updated last year
- GraphPart, a data partitioning method for ML on biological sequences☆29Updated last year
- Repository for Protein-Vec, a protein embedding mixture of experts model☆38Updated last year
- A sequence-based pan model for peptide-MHC II binding affinity prediction.☆21Updated 3 years ago
- Fast protein domain structure embedding+search tool☆25Updated 3 months ago
- NetSurfP 3.0: Protein secondary structure and relative solvent accessibility prediction☆22Updated 2 years ago
- Nature Biotechnology: Ultra-fast, sensitive detection of protein remote homologs using deep dense retrieval☆119Updated last year
- Python code to color a PDB structure based on parameters from a multiple sequence alignment☆32Updated 2 years ago
- Secondary structure prediction of long non-coding RNA: review and experimental comparison of existing approaches, L.A. Bugnon, A.A. Edera…☆18Updated last year
- A fast, alignment-free method for estimating sequence conservation using protein sequence embedding☆17Updated 2 years ago