Graph-based representation learning method for protein function prediction
☆24Aug 25, 2025Updated 10 months ago
Alternatives and similar repositories for Graph2GO
Users that are interested in Graph2GO are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A Deep Learning Model for Protein Function Prediction☆18Jul 31, 2020Updated 5 years ago
- Improving protein function prediction with synthetic feature samples created by generative adversarial networks☆22Oct 6, 2020Updated 5 years ago
- [Briefings in Bioinformatics'20] Integrating multi-network topology for gene function prediction using deep neural networks☆14Sep 5, 2019Updated 6 years ago
- Code for reproducing results of "Unsupervised embeddings is all you need for protein function prediction"☆41Jul 6, 2023Updated 2 years ago
- NLP for Proteins - A paper collection☆13Sep 10, 2020Updated 5 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Function prediction using a deep ontology-aware classifier☆87Nov 21, 2022Updated 3 years ago
- This repository contains all DeepCLIP Python code☆11May 30, 2024Updated 2 years ago
- A deep learning framework for deubiquitnase-substrate interaction identification☆13Jul 31, 2025Updated 11 months ago
- DeepGraphGO: graph neural network for large-scale, multispecies protein function prediction☆35Jul 28, 2021Updated 4 years ago
- Protein orthologous group assignment with deep learning☆30Dec 16, 2025Updated 6 months ago
- Computes a molecular graph for protein structures.☆59Jun 22, 2026Updated last week
- DeepGO with GOPlus axioms☆103Oct 23, 2025Updated 8 months ago
- MetaProFi is a bloom filter based tool for storing and querying sequence data for accurate identification of functionally relevant geneti…☆13Apr 14, 2022Updated 4 years ago
- Learning Neural Generative Dynamics for Molecular Conformation Generation (ICLR 2021)☆22Sep 20, 2021Updated 4 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Model to predict kinase-ligand pKi values.☆12Jul 6, 2023Updated 2 years ago
- uorf4u is a bioinformatics tool for conserved upstream ORF annotation.☆15Sep 16, 2025Updated 9 months ago
- A browser extension and web application for extracting gene sets from GEO and piping them to Enrichr.☆15May 1, 2023Updated 3 years ago
- ☆25Apr 27, 2022Updated 4 years ago
- Emap2sec is a computational tool to identify protein secondary structures☆16Jul 31, 2024Updated last year
- ☆19Sep 20, 2020Updated 5 years ago
- Nextflow pipeline for the computation of structure-based MSAs with AlphaFold2 models☆13Dec 20, 2022Updated 3 years ago
- ☆21Feb 22, 2024Updated 2 years ago
- ☆12Jul 31, 2020Updated 5 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Augmenting a training dataset of the generative diffusion model for molecular docking with artificial binding pockets☆10Jun 10, 2026Updated 3 weeks ago
- Code for the paper "Generating and designing DNA with deep generative models" (arXiv:1712.06148)☆42Apr 14, 2018Updated 8 years ago
- AbLang: A language model for antibodies☆17Sep 22, 2023Updated 2 years ago
- Water Network-Augmented Two-State model for Protein−Ligand Binding Affinity Prediction☆12Jun 10, 2023Updated 3 years ago
- A set of scripts to help automate the construction of data sets for multi-gene phylogenetic analyses.☆13Mar 13, 2019Updated 7 years ago
- Implementation of Accurate Protein Structure Prediction by Embeddings and Deep Learning Representations☆23Feb 20, 2020Updated 6 years ago
- quincunx: an R package to query, download and wrangle PGS Catalog data☆16Aug 14, 2022Updated 3 years ago
- Disease Gene Prioritization with Privileged Information and Heteroscedastic Dropout☆11Jan 28, 2021Updated 5 years ago
- The source codes for our paper submitted to Neurocomputing in 2017. We propose a linear label propagation method (LPLNP method) to predic…☆18Jun 5, 2017Updated 9 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Simple and efficient access to genomic data for deep learning models.☆43Jan 9, 2020Updated 6 years ago
- ☆12Jan 31, 2023Updated 3 years ago
- Learning Tree structures and Tree metrics☆24Aug 8, 2024Updated last year
- Preforms De novo protein design using machine learning and PyRosetta to generate a novel protein structure☆52Mar 7, 2025Updated last year
- Ancestral Sequence Reconstruction in Python☆15May 9, 2019Updated 7 years ago
- A functional profiler for metagenomes using FracMinHash☆21Apr 20, 2026Updated 2 months ago
- raw data from tax-credit project☆14Sep 19, 2019Updated 6 years ago