Charrick / SDN2GO
A Deep Learning Model for Protein Function Prediction
☆16Updated 4 years ago
Alternatives and similar repositories for SDN2GO:
Users that are interested in SDN2GO are comparing it to the libraries listed below
- Graph-based representation learning method for protein function prediction☆24Updated 4 years ago
- Function prediction using a deep ontology-aware classifier☆81Updated 2 years ago
- NLP for Proteins - A paper collection☆13Updated 4 years ago
- PaccMann models for protein language modeling☆41Updated 3 years ago
- Multi-Channel Deep Chemogenomic Modeling of Receptor-Ligand Binding Affinity Prediction for Drug Discovery☆27Updated 3 years ago
- ☆16Updated 3 years ago
- Parameter-efficient embeddings for proteins, pretrained using a contrastive loss.☆27Updated 4 years ago
- ☆55Updated 4 years ago
- HoTS: Sequence-based prediction of binding regions and drug-target interactions.☆26Updated 2 years ago
- A Prot paper related materials☆10Updated 2 years ago
- This repository provides an implementation of the DTiGEMSplus tool, a network-based method for computational Drug-Target Interaction pred…☆27Updated 3 years ago
- This is the repository for PIPR. This repository contains the source code and links to some datasets used in the ISMB/ECCB-2019 paper "Mu…☆93Updated 2 years ago
- Modelling the Language of Life - Deep Learning Protein Sequences☆72Updated 4 years ago
- A deep learning framework for high-throughput mechanism-driven phenotype screening☆49Updated 3 years ago
- ☆50Updated 2 years ago
- ☆22Updated 3 years ago
- Trainable representation analysis study repository☆41Updated 2 years ago
- DeepGraphGO: graph neural network for large-scale, multispecies protein function prediction☆34Updated 3 years ago
- DeepGO with GOPlus axioms☆90Updated 9 months ago
- TransDTI: Transformer-based language models for estimating DTIs and building a drug-recommendation workflow☆11Updated 2 years ago
- ☆17Updated 2 years ago
- Fast, state-of-the-art ab initio prediction of protein secondary structure in 3 and 8 classes☆45Updated 4 years ago
- ProtFeat is protein feature extraction tool that utilizes POSSUM and iFeature.☆19Updated 5 months ago
- ☆15Updated 4 years ago
- Multi-label protein function annotation☆7Updated last year
- Using Transformer protein embeddings with a linear attention mechanism to make SOTA de-novo predictions for the subcellular location of p…☆60Updated last year
- MSA-Regularized Protein Sequence Transformer toward Predicting Genome-Wide Chemical-Protein Interactions: Application to GPCRome Deorphan…☆11Updated 2 years ago
- ☆23Updated last year
- Alignment-free structure prediction using protein language models☆22Updated 2 years ago
- Protein-protein interaction sites prediction through combining local and global features with deep neural networks☆52Updated 5 years ago