bcgsc / ntSynt-vizLinks
Multi-genome synteny block visualization tool
☆47Updated last week
Alternatives and similar repositories for ntSynt-viz
Users that are interested in ntSynt-viz are comparing it to the libraries listed below
Sorting:
- wgd v2: a suite of tools to uncover and date ancient polyploidy and whole-genome duplication☆37Updated 8 months ago
- Gapless provides combined scaffolding, gap-closing and assembly correction with long reads☆38Updated 2 years ago
- ContScout sequence contamination filter tool☆23Updated 5 months ago
- A shiny application to visualize MCscan result☆37Updated 3 years ago
- Genome Annotation Pipeline☆39Updated last year
- An R package to identify and classify duplicated genes from whole-genome protein sequence data☆28Updated last month
- ☆29Updated last year
- Toolkit for evolutionary analyses of linkage groups☆32Updated last year
- A genome assembly assessment pipeline.☆37Updated last year
- Automatic evaluation of HGTs☆30Updated 8 months ago
- MCMCtreeR: A package to estimate distribution values for temporal node constraints and prepare input files for MCMCtree☆45Updated 5 years ago
- ☆40Updated 2 years ago
- ☆33Updated 4 years ago
- A snakemake workflow for de novo genome assembly. It produces chromosome-scale primary/phased assemblies complete with organelles (mitoch…☆29Updated 5 months ago
- A python script for finding telomeric repeats (TTAGGG/CCCTAA) in FASTA files☆34Updated 3 years ago
- A tool for the recovery of unassembled telomeres from soft-clipped read alignments.☆44Updated this week
- HELIANO is a software for detection and classification of Helitron-like elements.☆31Updated 4 months ago
- ☆45Updated 2 years ago
- ☆32Updated 7 months ago
- ☆33Updated last year
- A quick user guide for de novo transposable element (TE) library generation and TE screening. Utilising; the Extensive de novo TE Annotat…☆27Updated 2 years ago
- STAG: Species Tree from All Genes☆34Updated 6 years ago
- We developed GenomeSyn as a new tool for constructing and visualizing genome synteny, its novel design and implementation can serve as a …☆30Updated 3 years ago
- TSEBRA: Transcript Selector for BRAKER☆48Updated 11 months ago
- Genome alignment and synteny plots☆32Updated 2 years ago
- Convergent substitution detection tool based on the PCOC model☆31Updated 3 years ago
- R package to draw syntenic plots in 3 different styles☆42Updated 2 months ago
- Dinoflagellate Annotation Workflow☆15Updated 3 years ago
- ☆23Updated 3 years ago
- reference-free estimation of ploidy level from whole genome sequencing data based on de Bruijn graph☆17Updated 2 years ago