Tiberius is a deep learning gene finder.
☆136Sep 4, 2026Updated this week
Alternatives and similar repositories for Tiberius
Users that are interested in Tiberius are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Using Deep Learning to predict gene annotations☆305Jul 22, 2026Updated last month
- ☆158Aug 11, 2026Updated 3 weeks ago
- BRAKER re-implemented with snakemake☆79Updated this week
- This is the standalone version of the EviAnn pipeline☆183Aug 11, 2026Updated 3 weeks ago
- GALBA is a pipeline for fully automated prediction of protein coding gene structures with AUGUSTUS in novel eukaryotic genomes for the sc…☆149Apr 13, 2026Updated 4 months ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- PSAURON is a machine learning model for rapid assessment of protein coding gene annotation☆64May 17, 2026Updated 3 months ago
- A genome completeness evaluation tool based on miniprot☆263Aug 17, 2026Updated 3 weeks ago
- ☆94Jul 31, 2026Updated last month
- Align proteins to genomes with splicing and frameshift☆417Jan 5, 2026Updated 8 months ago
- ☆24Nov 19, 2025Updated 9 months ago
- BRAKER is a pipeline for fully automated prediction of protein coding gene structures with GeneMark-ES/ET/EP/ETP and AUGUSTUS in novel eu…☆469Jun 17, 2026Updated 2 months ago
- Eukaryotic Genome Annotation Pipeline-External caller scripts and documentation☆207Updated this week
- TSEBRA: Transcript Selector for BRAKER☆52Apr 7, 2026Updated 5 months ago
- Learning and Aligning Large Protein Families with support of protein language models.☆34Updated this week
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- TOGA (Tool to infer Orthologs from Genome Alignments): implements a novel paradigm to infer orthologous genes. TOGA integrates gene annot…☆211Nov 23, 2025Updated 9 months ago
- Yet another Hi-C scaffolding tool☆183Nov 4, 2024Updated last year
- GeneMark-ETP: gene finding in eukaryotic genomes supported by transcriptome sequencing and protein homology☆31Apr 11, 2025Updated last year
- ☆190May 22, 2025Updated last year
- Identify and find telomeres, or telomeric repeats in a genome.☆176Nov 24, 2025Updated 9 months ago
- Telomere-to-telomere assembly of accurate long reads (PacBio HiFi, Oxford Nanopore Duplex, HERRO corrected Oxford Nanopore Simplex) and O…☆415Aug 25, 2026Updated last week
- k-mer based assembly evaluation☆353Jul 6, 2026Updated 2 months ago
- Tools for fast and flexible genome assembly scaffolding and improvement☆576Feb 14, 2024Updated 2 years ago
- source code for EVM☆128Nov 29, 2024Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Generating UTRs from SHort Reads☆12Sep 28, 2020Updated 5 years ago
- Hifiasm: a haplotype-resolved assembler for accurate Hifi reads☆810May 31, 2026Updated 3 months ago
- Detecting multi-genome synteny using minimizer graph mapping☆115Aug 20, 2026Updated 2 weeks ago
- Consensus genome annotation using OMA☆32Jan 14, 2026Updated 7 months ago
- FastOMA is a scalable software package to infer orthology relationship.☆102Aug 29, 2026Updated last week
- ☆32Mar 3, 2026Updated 6 months ago
- Compare the quality of multiple genomes, along with their annotations.☆26Updated this week
- Multi-genome synteny block visualization tool☆65Updated this week
- A single fast and exhaustive tool for summary statistics and simultaneous *fa* (fasta, fastq, gfa [.gz]) genome assembly file manipulatio…☆130Jun 18, 2026Updated 2 months ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- SALSA: A tool to scaffold long read assemblies with Hi-C data☆189May 17, 2024Updated 2 years ago
- Genome mapping and spliced alignment of cDNA or amino acid sequences☆114Jul 11, 2026Updated last month
- An accurate GFF3/GTF lift over pipeline☆552Aug 1, 2023Updated 3 years ago
- Find, circularise and annotate mitogenome from PacBio assemblies☆200May 11, 2025Updated last year
- ☆15Jun 18, 2026Updated 2 months ago
- PhaseGrass, a reference-based phasing workflow generating chromosome-level haplotype-resolved diploid assembly for highly heterozygous ge…☆17Jun 2, 2026Updated 3 months ago
- CDS prediction in transcripts☆22Mar 5, 2025Updated last year