Tiberius is a deep learning gene finder.
☆101Mar 12, 2026Updated 2 weeks ago
Alternatives and similar repositories for Tiberius
Users that are interested in Tiberius are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Using Deep Learning to predict gene annotations☆278Mar 6, 2026Updated 3 weeks ago
- GALBA is a pipeline for fully automated prediction of protein coding gene structures with AUGUSTUS in novel eukaryotic genomes for the sc…☆148Jan 27, 2025Updated last year
- Learning and Aligning Large Protein Families with support of protein language models.☆31Updated this week
- PSAURON is a machine learning model for rapid assessment of protein coding gene annotation☆54Dec 11, 2025Updated 3 months ago
- A genome completeness evaluation tool based on miniprot☆237Sep 18, 2025Updated 6 months ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- Generating UTRs from SHort Reads☆11Sep 28, 2020Updated 5 years ago
- TOGA (Tool to infer Orthologs from Genome Alignments): implements a novel paradigm to infer orthologous genes. TOGA integrates gene annot…☆205Nov 23, 2025Updated 4 months ago
- ☆33Jul 9, 2024Updated last year
- ☆186May 22, 2025Updated 10 months ago
- Multi-genome synteny block visualization tool☆55Updated this week
- ☆91Dec 3, 2025Updated 3 months ago
- A fully automated gene annotator from RNA-Seq expression data☆61Jul 1, 2023Updated 2 years ago
- Whole genome visualization and comparative genomics in R☆21Feb 18, 2025Updated last year
- This is the standalone version of the EviAnn pipeline☆143Mar 13, 2026Updated 2 weeks ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- ClaMSA (Classify Multiple Sequence Alignments).☆13Nov 21, 2024Updated last year
- BRAKER is a pipeline for fully automated prediction of protein coding gene structures with GeneMark-ES/ET/EP/ETP and AUGUSTUS in novel eu…☆451Oct 20, 2025Updated 5 months ago
- TSEBRA: Transcript Selector for BRAKER☆49Nov 14, 2025Updated 4 months ago
- Align proteins to genomes with splicing and frameshift☆396Jan 5, 2026Updated 2 months ago
- k-mer based assembly evaluation☆341Jun 28, 2024Updated last year
- pangenome from maximal blocks in an MSA☆11Sep 17, 2024Updated last year
- 🚀 LiftOn: Accurate annotation mapping for GFF/GTF across assemblies☆123Feb 24, 2026Updated last month
- FastK based version of Merqury☆33Jan 19, 2026Updated 2 months ago
- Find, circularise and annotate mitogenome from PacBio assemblies☆192May 11, 2025Updated 10 months ago
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Yet another Hi-C scaffolding tool☆175Nov 4, 2024Updated last year
- ☆45Dec 11, 2025Updated 3 months ago
- Integrated toolkit for analysis and evaluation of annotated genomes☆25Aug 1, 2025Updated 7 months ago
- Genome mapping and spliced alignment of cDNA or amino acid sequences☆110Feb 28, 2026Updated last month
- An R package to identify and classify duplicated genes from whole-genome protein sequence data☆33Sep 11, 2025Updated 6 months ago
- oxford dot plots☆169Feb 17, 2026Updated last month
- Earl Grey: A fully automated TE curation and annotation pipeline☆200Updated this week
- GeneMark-ETP: gene finding in eukaryotic genomes supported by transcriptome sequencing and protein homology☆28Apr 11, 2025Updated 11 months ago
- Hifiasm: a haplotype-resolved assembler for accurate Hifi reads☆757Mar 18, 2025Updated last year
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Eukaryotic Genome Annotation Pipeline-External caller scripts and documentation☆183Dec 16, 2025Updated 3 months ago
- Reduce genome assembly redundancy using shared mapped k-mer method.☆15Apr 28, 2025Updated 11 months ago
- An accurate GFF3/GTF lift over pipeline☆531Aug 1, 2023Updated 2 years ago
- HERRO is a highly-accurate, haplotype-aware, deep-learning tool for error correction of Nanopore R10.4.1 or R9.4.1 reads (read length of …☆242Feb 3, 2026Updated last month
- Repeat-aware polishing genomes assembled using HiFi long reads☆98Nov 12, 2025Updated 4 months ago
- a tool to evaluate long-read error correction mainly with PacBio High-Fidelity Reads (HiFi reads).☆21Dec 5, 2023Updated 2 years ago
- ☆16Mar 2, 2026Updated 3 weeks ago