Gaius-Augustus / TiberiusView external linksLinks
Tiberius is a deep learning gene finder.
☆95Updated this week
Alternatives and similar repositories for Tiberius
Users that are interested in Tiberius are comparing it to the libraries listed below
Sorting:
- Learning and Aligning Large Protein Families with support of protein language models.☆30Feb 6, 2026Updated last week
- GALBA is a pipeline for fully automated prediction of protein coding gene structures with AUGUSTUS in novel eukaryotic genomes for the sc…☆148Jan 27, 2025Updated last year
- Using Deep Learning to predict gene annotations☆275Feb 5, 2026Updated last week
- PSAURON is a machine learning model for rapid assessment of protein coding gene annotation☆53Dec 11, 2025Updated 2 months ago
- pangenome from maximal blocks in an MSA☆11Sep 17, 2024Updated last year
- A genome completeness evaluation tool based on miniprot☆233Sep 18, 2025Updated 4 months ago
- TOGA (Tool to infer Orthologs from Genome Alignments): implements a novel paradigm to infer orthologous genes. TOGA integrates gene annot…☆203Nov 23, 2025Updated 2 months ago
- Generating UTRs from SHort Reads☆11Sep 28, 2020Updated 5 years ago
- A fully automated gene annotator from RNA-Seq expression data☆61Jul 1, 2023Updated 2 years ago
- TSEBRA: Transcript Selector for BRAKER☆49Nov 14, 2025Updated 3 months ago
- ClaMSA (Classify Multiple Sequence Alignments).☆13Nov 21, 2024Updated last year
- ☆186May 22, 2025Updated 8 months ago
- ☆89Dec 3, 2025Updated 2 months ago
- 🚀 LiftOn: Accurate annotation mapping for GFF/GTF across assemblies☆121Nov 21, 2025Updated 2 months ago
- Multi-genome synteny block visualization tool☆52Feb 3, 2026Updated last week
- k-mer based assembly evaluation☆338Jun 28, 2024Updated last year
- This is the standalone version of the EviAnn pipeline☆136Feb 5, 2026Updated last week
- FastK based version of Merqury☆30Jan 19, 2026Updated 3 weeks ago
- Whole genome visualization and comparative genomics in R☆21Feb 18, 2025Updated 11 months ago
- Align proteins to genomes with splicing and frameshift☆395Jan 5, 2026Updated last month
- GeneMark-ETP: gene finding in eukaryotic genomes supported by transcriptome sequencing and protein homology☆27Apr 11, 2025Updated 10 months ago
- An integrated high performance bioinformatics toolkit☆23Apr 24, 2019Updated 6 years ago
- Integrated toolkit for analysis and evaluation of annotated genomes☆25Aug 1, 2025Updated 6 months ago
- Find, circularise and annotate mitogenome from PacBio assemblies☆191May 11, 2025Updated 9 months ago
- ☆45Dec 11, 2025Updated 2 months ago
- Genome mapping and spliced alignment of cDNA or amino acid sequences☆110Jan 26, 2026Updated 2 weeks ago
- ☆33Jul 9, 2024Updated last year
- A organelle de novo genome assembly toolkit☆74Feb 22, 2025Updated 11 months ago
- source code for EVM☆122Nov 29, 2024Updated last year
- Iterative error correction of long reads☆13Dec 9, 2022Updated 3 years ago
- AlfaPang builds pangenome graphs without alignments or references.☆15Nov 7, 2025Updated 3 months ago
- BRAKER is a pipeline for fully automated prediction of protein coding gene structures with GeneMark-ES/ET/EP/ETP and AUGUSTUS in novel eu…☆445Oct 20, 2025Updated 3 months ago
- Earl Grey: A fully automated TE curation and annotation pipeline☆192Jan 19, 2026Updated 3 weeks ago
- An accurate GFF3/GTF lift over pipeline☆526Aug 1, 2023Updated 2 years ago
- Fast and space-efficient taxonomic classification of long reads☆43Aug 25, 2025Updated 5 months ago
- Parallel implementation of the LAST aligner☆18Nov 27, 2016Updated 9 years ago
- ☆16Feb 2, 2026Updated last week
- Robust individual and aggregate checksums for nucleotide sequences☆17Feb 8, 2026Updated last week
- Detecting multi-genome synteny using minimizer graph mapping☆101Updated this week