bcb-unl / run_dbcanLinks
Run_dbcan V5
☆40Updated this week
Alternatives and similar repositories for run_dbcan
Users that are interested in run_dbcan are comparing it to the libraries listed below
Sorting:
- ☆62Updated last year
- ☆81Updated 2 months ago
- A tool to raise the quality of viral genomes assembled from short-read metagenomes via resolving and joining of contigs fragmented during…☆82Updated 4 months ago
- ☆66Updated last year
- A pipeline to computationally identify invertible DNA regions and quantify their orientations.☆32Updated 2 years ago
- Unified Human Gut Virome Catalog☆41Updated 2 months ago
- EzAAI - High Throughput Prokaryotic AAI Calculator☆46Updated 6 months ago
- A program for detection of tRNA genes☆82Updated 3 years ago
- VirBot: a protein-based RNA virus detector for metagenomic data☆34Updated last year
- Phylogenetic orthology inference for comparative genomics☆93Updated 2 weeks ago
- Workflow to rapidly quantify taxa from all domains of life, directly from short-read human gut metagenomes☆71Updated last month
- An algorithm for clustering metagenomic sequences.☆41Updated last month
- Binning Virus Genomes from Metagenomes☆69Updated 3 years ago
- BRIG is a cross-platform (Windows/Mac/Unix) application that can display circular comparisons between a large number of genomes, with a f…☆37Updated 6 years ago
- A tool for representing genomic potential and transcriptomic expression into KEGG pathways☆61Updated last year
- ☆34Updated 2 years ago
- UFCG: Universal Fungal Core Genes☆34Updated 6 months ago
- CLI tool to annotate genes with KOfam☆88Updated 2 years ago
- Python code for versatile Functional Ontology Assignments for Metagenomes searching via Hidden Markov Model (HMM) with environmental focu…☆64Updated last month
- Predict the function of phage hypothetical proteins using an LSTM model trained with Phage Synteny☆58Updated 7 months ago
- Fast and accurate tool for calculating Average Nucleotide Identity (ANI) and clustering virus genomes and metagenomes☆96Updated 8 months ago
- ShortBRED is a pipeline to take a set of protein sequences, reduce them to a set of unique identifying strings ("markers"), and then sear…☆31Updated last year
- ☆32Updated last year
- All scripts used for the analysis of the twilight of the pan-genome, and scripts available for others to apply similar analysis☆19Updated 4 years ago
- zol (& fai): large-scale targeted detection and evolutionary investigation of gene clusters (i.e. BGCs, phages, etc.)☆71Updated 3 weeks ago
- PATO is a R package designed to analyze pangenomes (set of genomes) intra or inter species.☆62Updated 2 years ago
- ☆33Updated 3 months ago
- Exploring the "dusk matter" of the RNA virosphere☆37Updated 3 years ago
- ☆31Updated this week
- A toolkit for prokaryotic comparative genomics☆51Updated 3 months ago