Alternatives and similar repositories for pathview

Users that are interested in pathview are comparing it to the libraries listed below

• abodein / timeOmics
  Time-Course Multi-Omics data integration
  ☆26Updated last year
• 123xiaochen / VCFshiny
  ☆29Updated last year
• s-andrews / sradownloader
  A script to make downloading of SRA/GEO data easier
  ☆33Updated 2 years ago
• andreasmock / MetaboDiff
  ☆33Updated 5 years ago
• rnakato / DROMPAplus
  ChIP-seq pipeline tool for quality check, normalization, statistical analysis, and visualization of multiple ChIP-seq samples.
  ☆24Updated 3 months ago
• datapplab / SBGNview
  ☆28Updated 2 years ago
• jokergoo / KeywordsEnrichment
  ☆31Updated 2 years ago
• Oshlack / MINTIE
  Method for Identifying Novel Transcripts and Isoforms using Equivalence classes, in cancer and rare disease.
  ☆37Updated last year
• mdozmorov / RNA-seq_notes
  A continually expanding collection of RNA-seq tools
  ☆53Updated 3 months ago
• wyguo / ThreeDRNAseq
  A pipeline for differential expression and differential alternative splicing analysis
  ☆66Updated last year
• atc3 / maxquant_linux_guide
  A guide to running MaxQuant in Linux
  ☆35Updated 5 years ago
• drpowell / degust
  An interactive web-tool for RNA-seq analysis
  ☆70Updated last month
• djhn75 / RNAEditor
  ☆15Updated 3 years ago
• jianhong / trackViewer.documentation
  documentation for trackViewer
  ☆29Updated 6 years ago
• apcamargo / tspex
  tspex: tissue-specificity calculator
  ☆36Updated 2 years ago
• cccnrc / plot-VCF
  visual analysis of your VCF files
  ☆38Updated 3 years ago
• snystrom / memes
  An R interface to the MEME Suite
  ☆54Updated last week
• JSB-UCLA / Clipper
  A p-value-free method for controlling false discovery rates in high-throughput biological data with two conditions
  ☆41Updated 3 years ago
• ulelab / ultraplex
  Ultra-fast 5' and 3' demultiplexer
  ☆28Updated last year
• Searchlight2 / Searchlight2
  Rapid analysis and visualisation for bulk RNA-seq, psuedo-bulk RNA-seq, GeoMx and Proteomic datasets.
  ☆30Updated last year
• nuno-agostinho / psichomics
  Interactive R package to quantify, analyse and visualise alternative splicing
  ☆37Updated last week
• ashleymaeconard / TIMEOR
  TIMEOR: Trajectory Inference and Mechanism Exploration with Omics Data in R
  ☆17Updated 3 years ago
• jfjlaros / demultiplex
  Versatile FASTA/FASTQ demultiplexer.
  ☆33Updated last year
• nf-core / rnasplice
  rnasplice is a bioinformatics pipeline for RNA-seq alternative splicing analysis
  ☆63Updated 7 months ago
• blekhmanlab / host_gene_microbiome_interactions
  Analysis framework for integrating gut microbiome and host gene expression data
  ☆34Updated 3 years ago
• stephenturner / mergelanes
  Merge fastq files split over lanes
  ☆20Updated 7 years ago
• pachterlab / splitcode
  Flexible and efficient parsing, interpreting and editing of sequencing reads
  ☆45Updated last month
• TrinityCTAT / CTAT-VirusIntegrationFinder
  ☆17Updated 5 months ago
• AngelCampos / txtools
  An R package to process and analyze transcriptomic data
  ☆18Updated 7 months ago
• mritchielab / GlimmaV2
  interactive plots for differential expression analysis
  ☆34Updated 6 months ago