Alternatives and similar repositories for transposon_annotation_tools

Users that are interested in transposon_annotation_tools are comparing it to the libraries listed below

• zhangrengang / SOI
  Robust identification of orthologous Synteny with the Orthology Index
  ☆29Updated 2 weeks ago
• SwiftSeal / resistify
  Resistify is a program which rapidly identifies and classifies plant resistance genes from protein sequences. It is designed to be lightw…
  ☆40Updated this week
• almeidasilvaf / doubletrouble
  An R package to identify and classify duplicated genes from whole-genome protein sequence data
  ☆27Updated last week
• bcgsc / ntSynt-viz
  Multi-genome synteny block visualization tool
  ☆44Updated 7 months ago
• hahnlab / CAGEE
  Computational Analysis of Gene Expression Evolution
  ☆43Updated last month
• yhw320 / PanSyn
  ☆20Updated last year
• ChuanzhengWei / sorghum_T2T
  The codes to assemble two sorghum cultivars
  ☆10Updated last year
• jmsong2 / GenomeSyn
  We developed GenomeSyn as a new tool for constructing and visualizing genome synteny, its novel design and implementation can serve as a …
  ☆29Updated 3 years ago
• yanyew / SynGAP
  ☆39Updated 10 months ago
• lauguma / GWideCodeML
  A Python package for testing evolutionary hypotheses in genome-wide approaches.
  ☆31Updated 4 years ago
• lardo / khaper
  ☆28Updated 3 years ago
• molevol-ub / bitacora
  BITACORA: A Bioinformatics tool for gene family annotation
  ☆48Updated 3 months ago
• Immortal2333 / Telomeres_and_Centromeres
  This is a method to find telomeres and centromeres in plants.
  ☆41Updated 2 years ago
• Dee-chen / Tree2gd
  ☆44Updated 2 years ago
• i10labtitech / GINGER
  ☆29Updated last year
• CMB-BNU / PloidyFrost
  reference-free estimation of ploidy level from whole genome sequencing data based on de Bruijn graph
  ☆17Updated 2 years ago
• lly1214 / CAU-T2T-Sheep
  A complete telomere-to-telomere assembly of sheep: T2T-sheep1.0
  ☆20Updated 10 months ago
• sanger-tol / yahs
  Yet another Hi-C scaffolding tool
  ☆22Updated 10 months ago
• PalMuc / TransPi
  TransPi – a comprehensive TRanscriptome ANalysiS PIpeline for de novo transcriptome assembly
  ☆27Updated 3 years ago
• simon19891216 / CentIER
  ☆38Updated last month
• Yandell-Lab / maker
  Genome Annotation Pipeline
  ☆36Updated last year
• dePamphilis / PlantTribes
  PlantTribes is a collection of automated gene family analysis pipelines for comparative plant genomics
  ☆35Updated 2 years ago
• cfarkas / annotate_my_genomes
  A genome annotation pipeline that use short and long sequencing reads alignments from animal genomes
  ☆30Updated last year
• symgenoevolab / SyntenyFinder
  SyntenyFinder contains a collection of scripts for performing and visualizing macrosynteny analyses. It supports annotated chromosome-lev…
  ☆32Updated 8 months ago
• obenno / ShinySyn
  A shiny application to visualize MCscan result
  ☆37Updated 2 years ago
• Jianwei-Zhang / DEGAP
  Dynamic Elongation of a Genome Assembly Path
  ☆22Updated last year
• fanagislab / EndHiC
  EndHic is a fast and easy-to-use Hi-C scaffolding tool, using the Hi-C links from contig end regions instead of whole contig regions to a…
  ☆24Updated 2 years ago
• sabifo4 / Tutorial_MCMCtree
  MCMCtree tutorials
  ☆24Updated last year
• panlab-bioinfo / TRFill
  a gap-filling tools of genome in complex region.
  ☆15Updated last month
• zhangrengang / subgenome_phasing_example
  An Example of Subgenome Phasing for Complex Allopolyploidy
  ☆13Updated 4 months ago