holstegelab / MotifScopeLinks
A tool for motif annotation and visualization in tandem repeats.
☆11Updated 6 months ago
Alternatives and similar repositories for MotifScope
Users that are interested in MotifScope are comparing it to the libraries listed below
Sorting:
- Characterization of Structural Variation in Chinese samples☆18Updated 3 years ago
- A method for measuring chromosome-specific telomere length from long reads☆22Updated last year
- T2Tools is a toolset contains several tools for T2T assembly, and it is under development.☆15Updated 2 months ago
- Generate pan-gene sets, given a collection of genome assemblies and corresponding gene models.☆17Updated 3 months ago
- A loose collection of scripts and utilities for processing and analyzing the Goat reference genome assembly☆11Updated 8 years ago
- Simple tools for working with Hi-C data☆18Updated 6 years ago
- Phasing reads with secondary alignments☆21Updated last year
- HiC-Hiker: A probabilistic model to determine contig orientation in chromosome-length scaffolds with Hi-C☆26Updated 4 years ago
- TGSFilter: An ultra-fast and efficient tool for long reads filtering and trimming☆26Updated last year
- SINE annotation tool for plant genomes☆18Updated last year
- A module for improving the insertion sequences of structural variant calls☆32Updated 4 years ago
- Scripts used to perform analyses in Rice et al. (2023)☆16Updated last year
- Methylatino phasing using PacBio CCS reads☆13Updated last year
- Some components that speed up and reduce resource cost for original ALLHiC☆14Updated 5 months ago
- plot genome alignment synteny☆21Updated 5 years ago
- A Hi-C scaffolding method☆22Updated 3 years ago
- a tool to evaluate long-read error correction mainly with PacBio High-Fidelity Reads (HiFi reads).☆21Updated 2 years ago
- The complete sequence of a Chinese individual☆10Updated last year
- ☆15Updated 3 years ago
- ☆16Updated 11 months ago
- Identification of conserved non-coding sequences in plants☆30Updated 2 months ago
- a fork of the gap-closing pipeline PBJelly☆15Updated 6 years ago
- ☆16Updated 4 years ago
- ☆21Updated 9 months ago
- Regenotyping structural variants through an accurate and efficient force-calling method☆20Updated 2 weeks ago
- Very simple and configurable all-in-one dotplot program☆14Updated 2 years ago
- somatic SV calling on matched tumor-normal co-assembly graphs☆22Updated last year
- Construct and Analyze the North American Vitis pangenome☆26Updated 3 months ago
- TD2☆25Updated last week
- Long Read Based SV Calling Tools Analysis☆14Updated last year