adamewing / methylartistLinks
Tools for plotting methylation data in various ways
☆164Updated this week
Alternatives and similar repositories for methylartist
Users that are interested in methylartist are comparing it to the libraries listed below
Sorting:
- pbsv - PacBio structural variant (SV) calling and analysis tools☆160Updated 8 months ago
- A tool for somatic structural variant calling using long reads☆152Updated last month
- Workflows and tutorials for LongRead analysis with specific focus on Oxford Nanopore data☆142Updated 3 months ago
- ☆141Updated 3 weeks ago
- ☆107Updated last month
- accurate LiftOver tool for new genome assemblies☆137Updated last year
- Pipeline for differential gene expression (DGE) and differential transcript usage (DTU) analysis using long reads☆108Updated 2 years ago
- Tandem repeat genotyping and visualization from PacBio HiFi data☆128Updated last week
- Jasmine: SV Merging Across Samples☆231Updated 11 months ago
- Transcriptome Annotation by Modular Algorithms (for long read RNA sequencing data)☆162Updated 2 years ago
- ☆124Updated 3 months ago
- Research release basecalling models and configurations☆116Updated 6 months ago
- An ultra-fast and efficient genomic tool for coverage calculation☆161Updated 7 months ago
- Dfam Transposable Element Tools Docker container.☆101Updated 2 weeks ago
- Pangenome-based genome inference☆149Updated last week
- A flexible, scalable, and reproducible pipeline to automate variant calling from raw sequence reads, with lots of bells and whistles - fo…☆110Updated 4 months ago
- Comprehensive TE insertion identification with WGS/WES data from multiple sequencing technics☆117Updated 4 months ago
- Wally: Visualization of aligned sequencing reads and contigs☆120Updated last month
- Structural Variant Identification Method using Long Reads☆178Updated 4 years ago
- Snakemake pipelines for nanopore sequencing data archiving and processing☆91Updated 3 years ago
- PacBio Assembly Tool Suite: Reads in ⇨ Assembly out☆118Updated 5 years ago
- A tool to identify, orient, trim and rescue full length cDNA reads☆83Updated 3 years ago
- Hierarchical Alignment Format☆173Updated 2 months ago
- A minimap2 frontend for PacBio native data formats☆205Updated last week
- Collection of tools for the analysis of CpG data☆97Updated 4 months ago
- Constructing a pangenome gene graph☆198Updated 3 months ago
- LongQC is a tool for the data quality control of the PacBio and ONT long reads.☆176Updated last year
- Meta-pipeline to identify transposable element insertions using next generation sequencing data☆104Updated 5 months ago
- A complete diploid human genome☆137Updated last month
- A bioinformatics tool for working with modified bases☆225Updated 2 months ago