ksahlin / isONcorrectLinks
Error correction of ONT transcript reads
☆58Updated 2 years ago
Alternatives and similar repositories for isONcorrect
Users that are interested in isONcorrect are comparing it to the libraries listed below
Sorting:
- A Nextflow workflow to generate lift over files for any pair of genomes☆69Updated 3 weeks ago
- Genome scaffolding based on HiC data in heterozygous and high ploidy genomes☆60Updated 11 months ago
- ☆83Updated 9 months ago
- Structural variant caller☆55Updated 4 years ago
- Simple pileup-based variant caller☆94Updated 7 months ago
- Set of tools to manipulate and visualize modified base bam files☆58Updated 3 years ago
- Code for phasing SVs with SNPs☆52Updated 5 years ago
- ☆30Updated 4 years ago
- Long Reads Annotation pipeline☆72Updated 3 years ago
- Structural variant caller for real-time long-read sequencing data☆60Updated 3 years ago
- MethPhaser: methylation-based haplotype phasing of human genomes☆51Updated 9 months ago
- ☆78Updated 5 years ago
- Identify and annotate TE-mediated insertions in long-read sequence data☆46Updated 5 months ago
- Methylation Phasing for Nanopore Sequencing☆49Updated 2 years ago
- python plotly Circos from VCF☆40Updated last year
- perSVade: personalized Structural Variation detection☆40Updated 3 months ago
- A battery of methylation tools for PacBio HiFi reads☆44Updated last week
- ☆31Updated 2 months ago
- Copy number variant caller and depth visualization utility for PacBio HiFi reads☆45Updated last year
- Variant annotation and merging pipeline☆40Updated 4 months ago
- A (very) simple script to QC Hi-C data.☆26Updated 11 months ago
- Joint structural variant and copy number variant caller for HiFi sequencing data☆65Updated last month
- DEPRECATED - Workflow for the comprehensive detection and prioritization of variants in human genomes with PacBio HiFi reads☆39Updated 2 years ago
- ☆52Updated 2 months ago
- Workflow to prepare high accuracy single molecule consensus sequences from amplicon data using unique molecular identifiers☆35Updated last year
- Long-read splice alignment with high accuracy☆64Updated last year
- GENE-SWitCH project RNA-Seq analysis pipeline☆29Updated 9 months ago
- catalog for long-read sequencing tools☆32Updated 2 years ago
- Reference-based variant calling pipeline for a pair of phased haplotype assemblies☆104Updated 4 years ago
- Tools to annotate genomes using long read transcriptomics data☆45Updated 5 years ago