comprna / METEORELinks
Automatic DNA methylation detection from nanopore tools and their consensus model
☆79Updated 2 years ago
Alternatives and similar repositories for METEORE
Users that are interested in METEORE are comparing it to the libraries listed below
Sorting:
- Research release basecalling models and configurations☆115Updated 5 months ago
- Collection of tools for the analysis of CpG data☆97Updated 4 months ago
- Meta-pipeline to identify transposable element insertions using next generation sequencing data☆104Updated 5 months ago
- Visualise and analyse nanopore (ONT) raw signals☆124Updated 2 months ago
- Tandem repeat genotyping and visualization from PacBio HiFi data☆127Updated last week
- Snakemake pipelines for nanopore sequencing data archiving and processing☆91Updated 3 years ago
- A tool to identify, orient, trim and rescue full length cDNA reads☆83Updated 3 years ago
- Plotting tools for nanopore methylation data☆94Updated 3 months ago
- Tools for plotting methylation data in various ways☆164Updated this week
- LongQC is a tool for the data quality control of the PacBio and ONT long reads.☆176Updated last year
- Same species annotation lift over pipeline.☆98Updated 2 years ago
- A list of software for pangenomics☆142Updated 2 weeks ago
- Constructing a pangenome gene graph☆198Updated 3 months ago
- A flexible, scalable, and reproducible pipeline to automate variant calling from raw sequence reads, with lots of bells and whistles - fo…☆110Updated 4 months ago
- Dfam Transposable Element Tools Docker container.☆101Updated 2 weeks ago
- Pangenome-based genome inference☆149Updated this week
- ☆50Updated last month
- TransposonUltimate - a holistic set of tools for transposon identification☆84Updated 3 years ago
- Detecting genome structural variants with deep learning in single molecule sequencing☆113Updated 7 months ago
- List of genome assembly tools☆83Updated 2 weeks ago
- PacBio Assembly Tool Suite: Reads in ⇨ Assembly out☆118Updated 5 years ago
- accurate LiftOver tool for new genome assemblies☆137Updated last year
- A tool for somatic structural variant calling using long reads☆150Updated 3 weeks ago
- 🚀 LiftOn: Accurate annotation mapping for GFF/GTF across assemblies☆113Updated 4 months ago
- Comprehensive TE insertion identification with WGS/WES data from multiple sequencing technics☆117Updated 4 months ago
- Wally: Visualization of aligned sequencing reads and contigs☆120Updated last month
- Pipeline for differential gene expression (DGE) and differential transcript usage (DTU) analysis using long reads☆108Updated 2 years ago
- pbsv - PacBio structural variant (SV) calling and analysis tools☆160Updated 8 months ago
- A set of functions to visualise genotypes based on a VCF☆87Updated 3 years ago
- Structural Variant Identification Method using Long Reads☆178Updated 4 years ago