Alternatives and similar repositories for METEORE

Users that are interested in METEORE are comparing it to the libraries listed below

• nanoporetech / rerio
  Research release basecalling models and configurations
  ☆114Updated 2 months ago
• bergmanlab / mcclintock
  Meta-pipeline to identify transposable element insertions using next generation sequencing data
  ☆101Updated last month
• PacificBiosciences / pb-CpG-tools
  Collection of tools for the analysis of CpG data
  ☆86Updated last week
• eblerjana / pangenie
  Pangenome-based genome inference
  ☆133Updated 3 weeks ago
• giesselmann / nanopype
  Snakemake pipelines for nanopore sequencing data archiving and processing
  ☆91Updated 3 years ago
• PacificBiosciences / pb-assembly
  PacBio Assembly Tool Suite: Reads in ⇨ Assembly out
  ☆118Updated 4 years ago
• nanoporetech / pychopper
  A tool to identify, orient, trim and rescue full length cDNA reads
  ☆82Updated 3 years ago
• Dfam-consortium / TETools
  Dfam Transposable Element Tools Docker container.
  ☆95Updated 2 weeks ago
• epi2me-labs / modbam2bed
  ☆48Updated 10 months ago
• epi2me-labs / wf-transcriptomes
  ☆98Updated last month
• hiruna72 / squigualiser
  Visualise and analyse nanopore (ONT) raw signals
  ☆117Updated this week
• EichlerLab / pav
  Phased assembly variant caller
  ☆122Updated 7 months ago
• tobiasrausch / wally
  Wally: Visualization of aligned sequencing reads and contigs
  ☆118Updated 3 months ago
• informationsea / transanno
  accurate LiftOver tool for new genome assemblies
  ☆132Updated 11 months ago
• yfukasawa / LongQC
  LongQC is a tool for the data quality control of the PacBio and ONT long reads.
  ☆170Updated last year
• parklab / xTea
  Comprehensive TE insertion identification with WGS/WES data from multiple sequencing technics
  ☆114Updated 2 weeks ago
• wurmlab / flo
  Same species annotation lift over pipeline.
  ☆98Updated last year
• eldariont / svim
  Structural Variant Identification Method using Long Reads
  ☆172Updated 4 years ago
• moiexpositoalonsolab / grenepipe
  A flexible, scalable, and reproducible pipeline to automate variant calling from raw sequence reads, with lots of bells and whistles - fo…
  ☆102Updated 3 weeks ago
• PacificBiosciences / pbsv
  pbsv - PacBio structural variant (SV) calling and analysis tools
  ☆154Updated 4 months ago
• Kuanhao-Chao / LiftOn
  🚀 LiftOn: Accurate annotation mapping for GFF/GTF across assemblies
  ☆107Updated last week
• adamewing / methylartist
  Tools for plotting methylation data in various ways
  ☆156Updated this week
• DerKevinRiehl / TransposonUltimate
  TransposonUltimate - a holistic set of tools for transposon identification
  ☆84Updated 3 years ago
• voichek / kmersGWAS
  A library for running k-mers based GWAS
  ☆110Updated 8 months ago
• nanoporetech / pipeline-structural-variation
  Pipeline for calling structural variations in whole genomes sequencing Oxford Nanopore data
  ☆114Updated 3 years ago
• biocorecrg / master_of_pores
  Nextflow pipeline for analysis of direct RNA Nanopore reads
  ☆106Updated 3 weeks ago
• marbl / HG002
  A complete diploid human genome
  ☆121Updated 6 months ago
• colindaven / awesome-pangenomes
  A list of software for pangenomics
  ☆119Updated this week
• RemiAllio / MitoFinder
  MitoFinder: efficient automated large-scale extraction of mitogenomic data from high throughput sequencing data
  ☆106Updated last year
• mrvollger / StainedGlass
  Make colorful identity heatmaps of genomic sequence
  ☆117Updated last year