wdecoster / methplotlibLinks
Plotting tools for nanopore methylation data
☆94Updated 3 months ago
Alternatives and similar repositories for methplotlib
Users that are interested in methplotlib are comparing it to the libraries listed below
Sorting:
- Meta-pipeline to identify transposable element insertions using next generation sequencing data☆104Updated 5 months ago
- RNA modifications detection from Nanopore dRNA-Seq data☆87Updated 2 months ago
- Wally: Visualization of aligned sequencing reads and contigs☆120Updated last month
- Research release basecalling models and configurations☆115Updated 5 months ago
- A tool to identify, orient, trim and rescue full length cDNA reads☆83Updated 3 years ago
- Same species annotation lift over pipeline.☆98Updated 2 years ago
- Hybrid error correction of long reads using colored de Bruijn graphs☆106Updated 2 months ago
- Long read aligner☆115Updated 2 years ago
- ☆50Updated last month
- Tools for the analysis of structural variation in genomes☆81Updated last year
- Structural Variant Identification Method using Genome Assemblies☆127Updated 3 years ago
- A post sequencing QC tool for Oxford Nanopore sequencers☆103Updated 3 months ago
- Mikado is a lightweight Python3 pipeline whose purpose is to facilitate the identification of expressed loci from RNA-Seq data * and to s…☆104Updated 9 months ago
- A list of software for pangenomics☆142Updated 2 weeks ago
- Mapping pipeline for data generated using Arima-HiC☆81Updated last year
- A snakemake pipeline for SV analysis from nanopore genome sequencing☆52Updated 5 years ago
- Toolkit for calling structural variants using short or long reads☆111Updated last month
- Lima - Demultiplex Barcoded PacBio Samples☆67Updated 6 months ago
- Simple pileup-based variant caller☆93Updated 6 months ago
- SV caller for nanopore data☆92Updated 5 years ago
- 🚀 LiftOn: Accurate annotation mapping for GFF/GTF across assemblies☆113Updated 4 months ago
- GenMap - Fast and Exact Computation of Genome Mappability☆114Updated last year
- Snakemake pipelines for nanopore sequencing data archiving and processing☆91Updated 3 years ago
- A set of functions to visualise genotypes based on a VCF☆87Updated 3 years ago
- Visualise and analyse nanopore (ONT) raw signals☆124Updated 2 months ago
- Automatic DNA methylation detection from nanopore tools and their consensus model☆79Updated 2 years ago
- Tools to annotate genomes using long read transcriptomics data☆45Updated 4 years ago
- Bioinformatics tools for dealing with Multiple Alignment Format (MAF) files.☆109Updated 3 years ago
- ☆119Updated 2 weeks ago
- Quickly calculate and visualize sequence coverage in alignment files☆100Updated 6 years ago