Python bindings for SingleR
☆16Aug 14, 2026Updated last month
Alternatives and similar repositories for singler-py
Users that are interested in singler-py are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- singleCellNet in Python☆18Aug 6, 2026Updated last month
- Quick pre-QC knee plots for barcode based scRNAseq data☆13Dec 8, 2018Updated 7 years ago
- factor models for omics data☆48Updated this week
- ☆19May 25, 2026Updated 3 months ago
- Pareto Task Inference in Python☆23Updated this week
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- A Python implementation of the LEMUR algorithm for analyzing multi-condition single-cell RNA-seq data.☆29Jan 3, 2025Updated last year
- Multi-slice Spatial Transcriptome Domain Analysis.☆12Dec 13, 2024Updated last year
- Single-cell analysis methods in Rust☆34Jun 26, 2026Updated 2 months ago
- A modular tool for proportion analysis in single-cell sequencing data☆29Feb 26, 2026Updated 6 months ago
- Cross-modality matching and prediction with labeled Gromov-Wasserstein Optimal Transport.☆20Oct 10, 2024Updated last year
- Fast and scalable inference for single-cell differential gene expression of multiple patients☆15Jul 3, 2026Updated 2 months ago
- A toolbox for sparse contrastive principal component analysis☆12Feb 10, 2025Updated last year
- ☆36Aug 3, 2026Updated last month
- ☆23Aug 27, 2026Updated 3 weeks ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- scPRAM accurately predicts single-cell gene expression perturbation response based on attention mechanism☆19Oct 17, 2024Updated last year
- scType rewritten in python☆25Nov 7, 2024Updated last year
- Conveniently process a dictionary of anndatas☆23Apr 17, 2026Updated 5 months ago
- DIALOGUE is a dimensionality reduction method that uses cross-cell-type associations to identify multicellular programs (MCPs) and map th…☆125Jan 22, 2024Updated 2 years ago
- ☆17Jan 6, 2025Updated last year
- ☆28Updated this week
- Single Rust: Pioneering single-cell analysis with Rust's concurrency for scalable, high-throughput pipelines. 🧬🚀☆103Nov 24, 2025Updated 9 months ago
- Hierarchical Cell Annotation☆32Nov 17, 2024Updated last year
- This is a read-only mirror of the CRAN R package repository. forestploter — Create a Flexible Forest Plot. Homepage: https://github.com…☆14Apr 27, 2026Updated 4 months ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- ☆16May 6, 2026Updated 4 months ago
- ☆19May 29, 2026Updated 3 months ago
- Scanner of specific spatial patterns in tissues☆14Jul 15, 2022Updated 4 years ago
- Build contrasts for models defined with formulaic☆13Updated this week
- ☆10Jun 1, 2026Updated 3 months ago
- Spatially-aware quality control for spatial transcriptomics☆17Sep 8, 2026Updated 2 weeks ago
- Read and Write RDS files, in Python☆30Updated this week
- Pipeline for harmonising immunological receptor–epitope interactions☆17Sep 2, 2026Updated 2 weeks ago
- Access public biological ontologies.☆14Aug 7, 2024Updated 2 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- ☆38Sep 15, 2026Updated last week
- Group-wise release of ProtiCelli, including core code deveplopment.☆28Sep 15, 2026Updated last week
- ☆13Aug 14, 2020Updated 6 years ago
- An interactive tool to explore low dimensional embeddings of omics data.☆17Mar 27, 2026Updated 5 months ago
- Single-cell perturbation analysis☆346Updated this week
- Robust and scalable single-cell signature scoring☆29Updated this week
- Parsing MHC nomenclature in the wild☆21Sep 1, 2026Updated 3 weeks ago