theislab / scTabLinks
☆59Updated 11 months ago
Alternatives and similar repositories for scTab
Users that are interested in scTab are comparing it to the libraries listed below
Sorting:
- Single cell omics biology annotations☆51Updated 4 months ago
- Multimodal weakly supervised learning to identify disease-specific changes in single-cell atlases☆33Updated last week
- Vector representations of gene co-expression in single cell RNAseq.☆36Updated 2 months ago
- Gene regulatory network inference for RNA velocity and pseudotime data☆27Updated 5 months ago
- Python package for analysis of multiomic single cell RNA-seq and ATAC-seq.☆63Updated last month
- ☆50Updated 3 months ago
- CAST package☆40Updated 9 months ago
- Spatial direct messaging detected by bivariate Moran☆27Updated last month
- ☆54Updated 9 months ago
- ACTIONet single-cell analysis framework☆42Updated 11 months ago
- End-to-end analysis of spatial multi-omics data☆90Updated 2 weeks ago
- ☆81Updated last year
- ☆45Updated last month
- ☆16Updated 3 months ago
- ☆37Updated 3 months ago
- ☆26Updated last year
- Predict RNA velocity through deep learning☆70Updated last year
- Spatial reconstruction of dissociated single-cell data☆19Updated last year
- ☆55Updated 3 months ago
- ☆15Updated 3 years ago
- scDesign3 generates realistic in silico data for multimodal single-cell and spatial omics☆103Updated 5 months ago
- ☆36Updated 3 months ago
- ☆26Updated 3 months ago
- ☆55Updated last year
- cTPnet Package☆25Updated 3 years ago
- Tools for sgRNA calling in direct capture Perturb-seq data☆37Updated 2 years ago
- ☆46Updated last year
- Codebase for PRESCIENT (Potential eneRgy undErlying Single Cell gradIENTs) for generative modeling of single-cell time-series.☆48Updated 7 months ago
- Gene group activity utility functions for Scanpy☆84Updated 8 months ago
- A Python implementation of the LEMUR algorithm for analyzing multi-condition single-cell RNA-seq data.☆26Updated 7 months ago