☆12Nov 7, 2025Updated 4 months ago
Alternatives and similar repositories for task_batch_integration
Users that are interested in task_batch_integration are comparing it to the libraries listed below
Sorting:
- Pipeline framework for iteratively and reproducibly building and evaluating single cell atlases☆51Mar 11, 2026Updated last week
- ☆22Jan 6, 2026Updated 2 months ago
- Sequence-based prediction of peptide-TCR interactions using paired chain data☆13Feb 2, 2026Updated last month
- Antigen-receptor Design Against Peptide-MHC Targets☆20Jan 9, 2026Updated 2 months ago
- Tool for Motif Deconvolution in large HLA-II ligand datasets without the need of prior alignment.☆15Feb 17, 2025Updated last year
- 📦🕵️♀️ Semantic-release plugin that filters git commits based on the current working directory☆31Mar 13, 2026Updated last week
- A minimal gene set characterizes multiple classes of tumor-specific TIL among different cancer types☆11Mar 4, 2025Updated last year
- Uniform sampling on various geometric shapes☆10Jul 18, 2023Updated 2 years ago
- Discover how to build vision transformer from scratch with this comprehensive tutorial. Follow our step-by-step guide to create your own …☆11Apr 14, 2023Updated 2 years ago
- MHC-II presentation predictor☆13Aug 11, 2023Updated 2 years ago
- ☆17May 15, 2025Updated 10 months ago
- ☆32Mar 13, 2026Updated last week
- ☆13Oct 12, 2020Updated 5 years ago
- Differentiable Clustering with Perturbed Random Forests, NeurIPS2023☆13Oct 16, 2023Updated 2 years ago
- Numerical experiments for nested cross-validation paper☆14Jun 10, 2022Updated 3 years ago
- ☆17Jun 27, 2025Updated 8 months ago
- HLA typing for Sanger Based Test☆19Apr 7, 2023Updated 2 years ago
- Additional code and analysis from the single-cell integration benchmarking project☆71Dec 19, 2022Updated 3 years ago
- Efficient retrieval head analysis with triton flash attention that supports topK probability☆13Jun 15, 2024Updated last year
- Code and documentation for the curation of cellxgene datasets☆53Mar 1, 2026Updated 2 weeks ago
- Multigrate: multiomic data integration for single-cell genomics☆32Updated this week
- A scalable implementation of diffusion and flow-matching with XGBoost models, applied to calorimeter data.☆19Nov 3, 2024Updated last year
- Python implementations for Sparse CCA☆19Feb 24, 2023Updated 3 years ago
- PyTorch implementation for "Training and Inference on Any-Order Autoregressive Models the Right Way", NeurIPS 2022 Oral, TPM 2023 Best Pa…☆15May 31, 2023Updated 2 years ago
- STAgent is a multimodal LLM-based AI agent that enables deep research about spatial transcriptomics data☆50May 25, 2025Updated 9 months ago
- A Hierarchical Softmax Framework for PyTorch☆22Jul 10, 2025Updated 8 months ago
- Modelling insertion efficiency for Prime Insertion Experiments☆13Apr 1, 2024Updated last year
- A command-line font manager☆18Sep 29, 2016Updated 9 years ago
- cz-benchmarks is a package for standardized evaluation and comparison of machine learning models for biological applications.☆50Dec 19, 2025Updated 3 months ago
- 📂 HLA allele frequencies in tab-delimited format, downloaded from AFND.☆23Apr 23, 2024Updated last year
- ☆13May 19, 2024Updated last year
- ☆17Updated this week
- A new tool for harmonizing volumetric MRI data from unseen scanners (Garcia-Dias et al. 2020)☆18Jan 6, 2023Updated 3 years ago
- Meta in-context learning for protein fitness prediction☆16Feb 7, 2025Updated last year
- Portfolio REgret for Confidence SEquences☆21Jan 6, 2026Updated 2 months ago
- Snakemake pipeline that works with the scIB package to benchmark data integration methods.☆82Jan 23, 2025Updated last year
- 📝 [Paper] TCRen: predicting TCR-peptide recognition based on residue-level pairwise statistical potential☆24Mar 6, 2026Updated 2 weeks ago
- Single Cell Pretrained Regulatory network INference from Transcripts☆11Sep 17, 2024Updated last year
- Official implementation of Joint Multidimensional Scaling☆24Nov 19, 2023Updated 2 years ago