β17Jan 6, 2025Updated last year
Alternatives and similar repositories for pyroe
Users that are interested in pyroe are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- π π¬π¦ alevin-fry is an efficient and flexible tool for processing single-cell sequencing data, currently focused on single-cell transcβ¦β206Apr 15, 2026Updated last month
- Differential expression and allelic analysis, nonparametric statisticsβ32Jan 3, 2025Updated last year
- β15Nov 30, 2023Updated 2 years ago
- A set of tools for dealing with Citavi data in Rβ17Mar 6, 2026Updated 2 months ago
- β15Mar 27, 2026Updated last month
- Deploy to Railway using AI coding agents - Free Credits Offer β’ AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Mapping sequencing data to De Bruijn graphs, fastβ33May 7, 2026Updated last week
- Collection of National Science Foundation (NSF) proposal templates: pitches, general applications, etc.β16Nov 17, 2023Updated 2 years ago
- Python bindings for SingleRβ16May 6, 2026Updated 2 weeks ago
- Fast interval intersection libraryβ44Aug 20, 2025Updated 9 months ago
- Access public biological ontologies.β14Aug 7, 2024Updated last year
- Cookiecutter profile for making a NextFlow-based bioinformatics toolβ17Jul 8, 2024Updated last year
- β22May 6, 2022Updated 4 years ago
- A rust framework to make using alevin-fry even simplerβ66Updated this week
- Python package to perform normalization and variance-stabilization of single-cell dataβ28Jul 17, 2025Updated 10 months ago
- Deploy on Railway without the complexity - Free Credits Offer β’ AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- GREAT algorithm in Pythonβ15Oct 24, 2022Updated 3 years ago
- An integrated web-based resource for mapping functional networks of long or circular forms of non-coding RNAsβ10Jul 13, 2019Updated 6 years ago
- A mapper for 10x-flex single cell sequencing reads with fixed abstract geometriesβ44Apr 15, 2026Updated last month
- An efficient CLI to extract sequences from the SRAβ122Mar 4, 2026Updated 2 months ago
- Connect to a LSF main node directly or trough a ssh jump node, launch a jupyter notebook via bsub and open automatically a tunnel. The nβ¦β20Oct 27, 2021Updated 4 years ago
- PyTorch implementation of the paper "Neural Decomposition: Functional ANOVA with Variational Autoencoders"β25Jun 30, 2020Updated 5 years ago
- β56Aug 11, 2022Updated 3 years ago
- scpca-nf is the Nextflow workflow for processing Single-cell Pediatric Cancer Atlas Portal dataβ13Updated this week
- nimble aligner that will map your reads to the references on a laptopβ11Jun 29, 2017Updated 8 years ago
- 1-Click AI Models by DigitalOcean Gradient β’ AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Biology-centered data-driven quality control for scRNA-seqβ21May 22, 2023Updated 2 years ago
- Network construction Algorithmβ23Sep 5, 2024Updated last year
- Software package to design bridge RNAs as described by Durrant & Perry et al.β24Sep 25, 2025Updated 7 months ago
- Easily run WDL workflows on GCPβ14Sep 28, 2021Updated 4 years ago
- CMake BASIS makes it easy to create sharable software and libraries that work together. This is accomplished by combining and documentingβ¦β49Jul 7, 2021Updated 4 years ago
- Bioinformatics pipeline for single-cell 3' UTR isoform quantificationβ32Jan 29, 2026Updated 3 months ago
- β19Mar 19, 2026Updated 2 months ago
- Single-cell analysis methods in Rustβ35Nov 4, 2025Updated 6 months ago
- Genomic Features in Python from BioConductor's AnnotationHubβ23Apr 27, 2026Updated 3 weeks ago
- Managed Kubernetes at scale on DigitalOcean β’ AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Tool to estimate deltas for sequence sets and answer questions about relative contributionβ21Mar 25, 2025Updated last year
- β21Dec 26, 2025Updated 4 months ago
- A collection of papers about package management we can all ready!β11May 15, 2019Updated 7 years ago
- Find out if your SSH keys are safe!β12Oct 18, 2024Updated last year
- Rust in bioinformatics and computational biologyβ19Oct 22, 2022Updated 3 years ago
- Single Rust: Pioneering single-cell analysis with Rust's concurrency for scalable, high-throughput pipelines. π§¬πβ100Nov 24, 2025Updated 5 months ago
- ALP floating point compression in Rustβ52May 10, 2026Updated last week