scType rewritten in python
☆25Nov 7, 2024Updated last year
Alternatives and similar repositories for sc-type-py
Users that are interested in sc-type-py are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- scType goes spatial: ScType enables fast and accurate cell type identification from spatial transcriptomics data☆11Jul 11, 2024Updated last year
- Codes used in LISTA project.☆15Apr 17, 2024Updated 2 years ago
- Python bindings for SingleR☆16May 6, 2026Updated last month
- Identification of clone-specific and cancer-selective multi-targeting therapeutic options based on single-cell transcriptomic profiles of…☆24Feb 20, 2025Updated last year
- ☆12Jun 11, 2023Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Join subcellular Visium HD bins into cells☆143May 8, 2026Updated last month
- Repository in Support of EAGLE Submission☆24Oct 11, 2025Updated 8 months ago
- ☆16May 25, 2021Updated 5 years ago
- ☆17Dec 18, 2023Updated 2 years ago
- ☆17May 26, 2022Updated 4 years ago
- Spatial Transcriptomics Quantification pipeline for 10x Visium and H&E-stained whole slide images☆25May 20, 2026Updated 3 weeks ago
- ☆13Jun 6, 2024Updated 2 years ago
- ☆14Mar 28, 2025Updated last year
- STRIDE (Spatial TRanscRIptomics DEconvolution by topic modelling) is a cell-type deconvolution tool for spatial transcriptomics by using …☆17Aug 12, 2022Updated 3 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆37Oct 22, 2025Updated 7 months ago
- Inference of TCR motifs☆33Jun 17, 2025Updated 11 months ago
- ☆22Jan 10, 2025Updated last year
- ☆17Dec 3, 2025Updated 6 months ago
- ☆13Mar 29, 2024Updated 2 years ago
- Package for the analysis of Transcripts outside segmented cells in ST data☆30Jun 1, 2026Updated 2 weeks ago
- ☆66Jun 5, 2026Updated last week
- ☆21Apr 23, 2024Updated 2 years ago
- ☆40Nov 17, 2022Updated 3 years ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- ☆28Jan 25, 2022Updated 4 years ago
- ☆19Jan 6, 2024Updated 2 years ago
- An R package to write Datalog queries and interact with a Datomic database☆11Aug 12, 2021Updated 4 years ago
- Interoperability between SpatialData and the Xenium Explorer☆26Jul 31, 2024Updated last year
- Localization analysis software for super-resolution microscopy☆23Apr 30, 2026Updated last month
- ☆42Oct 16, 2024Updated last year
- SPatial INtegration of spatially resolved transcriptomics datasets☆18Mar 14, 2025Updated last year
- ☆11Sep 11, 2020Updated 5 years ago
- tutorials for spateo package☆20Dec 25, 2024Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- material related to the genetech courses☆10Sep 11, 2023Updated 2 years ago
- CORNAS is a fast method for reliable DEG calls in unreplicated conditions.☆13Jul 14, 2019Updated 6 years ago
- ☆11Jun 10, 2024Updated 2 years ago
- A tool for semi-automatic cell type classification☆487May 22, 2026Updated 3 weeks ago
- BANKSY: Spatial Clustering Algorithm that Unifies Cell-Typing and Tissue Domain Segmentation. Python package for spatial transcriptomics …☆82Nov 13, 2025Updated 7 months ago
- Weakly supervised learning uncovers phenotypic signatures in single-cell data☆40Jun 7, 2026Updated last week
- ☆22Jul 22, 2025Updated 10 months ago