scDiff: A General Single-Cell Analysis Framework via Conditional Diffusion Generative Models
☆34Aug 13, 2024Updated last year
Alternatives and similar repositories for scDiff
Users that are interested in scDiff are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Official repo for CellPLM: Pre-training of Cell Language Model Beyond Single Cells.☆104Mar 28, 2024Updated 2 years ago
- Single-Cell Multimodal Prediction via Transformer☆27Feb 7, 2024Updated 2 years ago
- DANCE: a deep learning library and benchmark platform for single-cell analysis☆389Jul 24, 2026Updated 2 weeks ago
- A large scale atlas coming with Graph Neural Network solution for spatial cell type deconvolution☆43Sep 15, 2024Updated last year
- A model developed for the generation of scRNA-seq data☆94Jan 21, 2026Updated 6 months ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- ☆39Apr 16, 2025Updated last year
- ☆13Jun 16, 2025Updated last year
- ☆360Dec 13, 2023Updated 2 years ago
- Reproducibility for the "Harmonization and Annotation of Single-cell Transcriptomics data with Deep Generative Models" paper☆13Jul 15, 2022Updated 4 years ago
- ☆19May 23, 2025Updated last year
- ☆84Jan 9, 2026Updated 7 months ago
- Repository for Fast Non-autoregressive Inverse Folding with Discrete Diffusion☆19Feb 8, 2024Updated 2 years ago
- Deep joint-leaning single-cell multi-omics model☆16Jun 27, 2022Updated 4 years ago
- Deep learning reveals predictive sequence concepts within immune repertoires to immunotherapy☆15Sep 17, 2022Updated 3 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Single-Cell (Perturbation) Model Library☆125Jul 27, 2026Updated 2 weeks ago
- ☆526Jul 15, 2026Updated 3 weeks ago
- ☆861Apr 20, 2025Updated last year
- GenePert: Leveraging GenePT Embeddings for Gene Perturbation Prediction☆22Oct 29, 2024Updated last year
- Identifying cell subpopulational differences among single-cell biospecimens☆17Sep 27, 2024Updated last year
- ☆169Jul 3, 2024Updated 2 years ago
- netNMF-sc: A network regularization algorithm for dimensionality reduction and imputation of single-cell expression data☆23Apr 19, 2021Updated 5 years ago
- Imputation method for scRNA-seq based on low-rank approximation☆81Dec 14, 2023Updated 2 years ago
- ☆18Jun 2, 2022Updated 4 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- CellAnn☆12Nov 3, 2023Updated 2 years ago
- Code for NeurIPS 2020 paper: "Estimating the Effects of Continuous-valued Interventions using Generative Adversarial Networks" by I. Bica…☆30Jan 8, 2021Updated 5 years ago
- [NeurIPS 2023] Official codes of "MuSe-GNN: Learning Unified Gene Representation From Multimodal Biological Graph Data"☆31Jul 2, 2025Updated last year
- Quantifying experimental perturbations at single cell resolution☆115Sep 27, 2024Updated last year
- ☆19Mar 31, 2024Updated 2 years ago
- Evaluation suite for transcriptomic perturbation effect prediction models. Includes support for single-cell foundation models.☆39Jul 29, 2025Updated last year
- Weakly supervised learning uncovers phenotypic signatures in single-cell data☆42Jun 7, 2026Updated 2 months ago
- C++ 聊天项目实战案例，涵盖grpc，并发线程，网络编程，qt开发，数据库等多种技术综合应用☆12Feb 13, 2026Updated 5 months ago
- Code for "LangCell: Language-Cell Pre-training for Cell Identity Understanding".☆70Dec 29, 2024Updated last year
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Repository for Nicheformer: a foundation model for single-cell and spatial omics☆170Nov 23, 2025Updated 8 months ago
- ☆21Nov 12, 2025Updated 8 months ago
- ☆24Nov 6, 2024Updated last year
- [Cell Patterns] Codes for paper: scELMo: Embeddings from Language Models are Good Learners for Single-cell Data Analysis☆24Jan 31, 2026Updated 6 months ago
- Models and datasets for perturbational single-cell omics☆180Aug 19, 2022Updated 3 years ago
- ☆17Jul 8, 2024Updated 2 years ago
- Code for the meQTL analyses presented in Hawe et al. 2021 Nature Genetics☆14Jan 14, 2022Updated 4 years ago