CellAnn
☆12Nov 3, 2023Updated 2 years ago
Alternatives and similar repositories for CellAnn_shinyapp
Users that are interested in CellAnn_shinyapp are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Single-cell immune repertoire trajectory analysis in R☆12Aug 8, 2025Updated last year
- A sandbox for benchmarking detection of out-of-reference cells in single-cell genomics data☆14Oct 21, 2024Updated last year
- general repo that holds all analysis and figures for the thymus spatial atlas by Yayon, Kedlian, Boehme, Radtke and many more!☆12Nov 20, 2024Updated last year
- Scalable, downsampling-free automated cell-population discovery, feature engineering, classification and visualization of single-cell (mo…☆12Aug 30, 2021Updated 5 years ago
- Comparison of Adaptive Immune Receptor Repertoires☆30Jan 29, 2025Updated last year
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- ☆27Jun 5, 2025Updated last year
- An R package to implement Differential Gene Set Enrichment Analysis (DGSEA): A statistical approach to quantify the relative enrichment o…☆15Apr 12, 2023Updated 3 years ago
- Code for paired TCR data analysis from TIRTL-seq experiments☆14Nov 24, 2025Updated 10 months ago
- ☆32Dec 29, 2023Updated 2 years ago
- p-IgGen: A Generative Paired Antibody Language Model☆13May 6, 2025Updated last year
- R package for analysing single cell data☆70Dec 8, 2022Updated 3 years ago
- Wrapper for the genoPlotR R package. This wrapper makes phylogeny, genbank files and blast comparisons that is needed for the genoPLotR p…☆14Oct 5, 2021Updated 4 years ago
- Coarse-graining of large single-cell RNA-seq data into metacells☆110Apr 16, 2026Updated 5 months ago
- Quantifying experimental perturbations at single cell resolution☆118Sep 27, 2024Updated last year
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Code to run the scHLApers pipeline for personalized single-cell HLA quantification☆18Jan 10, 2024Updated 2 years ago
- a programme for visualization of short sequence alignment and path navigation in graphical pan-genome☆26Jan 23, 2024Updated 2 years ago
- An R package for multi-dimensional pathway enrichment analysis☆18Jan 8, 2026Updated 8 months ago
- ☆13May 11, 2024Updated 2 years ago
- Survival Analysis for Protein-Level TCGA Analysis☆12Nov 30, 2018Updated 7 years ago
- Tools for Adaptive Immune Receptor Sequence-Based Machine and Deep Learning☆15Aug 22, 2026Updated last month
- ☆15Jul 16, 2026Updated 2 months ago
- Tidy R query API for the harmonised and curated CELLxGENE single-cell atlas.☆93Dec 18, 2024Updated last year
- SKATE R Utilities☆10Mar 7, 2026Updated 6 months ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- sharing interactive single cell gene expression visualizations from Seurat☆13May 18, 2023Updated 3 years ago
- 🧠 Visualizing Single Cell and Spatial Transcriptomics☆51Sep 10, 2026Updated 2 weeks ago
- GEfetch2R - Access Single-cell/Bulk RNA-seq Data from Public Repositories and Benchmark the Subsequent Format Conversion Tools☆42May 24, 2026Updated 4 months ago
- This is the repository which contains the code that was used to generate the results and figures of the “Single-cell RNA-sequencing revea…☆14Apr 14, 2026Updated 5 months ago
- R package expanding integrative analysis capabilities of Seurat by providing seamless access to popular integration methods and to an int…☆36Jul 23, 2026Updated 2 months ago
- Calculation of distance metrics for matrices☆26Mar 1, 2019Updated 7 years ago
- Analysis of cell-cell communication at single-cell resolution☆108Sep 10, 2024Updated 2 years ago
- The `multiGSEA` R package was designed to run a robust GSEA-based pathway enrichment for multiple omics layers.☆23May 4, 2026Updated 4 months ago
- Prostate Cancer Alteration Signature Analysis https://xsliulab.github.io/PC_CNA_signature/☆13May 17, 2021Updated 5 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- ☆10Nov 5, 2023Updated 2 years ago
- Kinship In Mixed Model Analysis of RNA-seq☆16Sep 2, 2026Updated 3 weeks ago
- Code, data and analysis for moslin.☆15Oct 7, 2024Updated last year
- Methods for decontamination of single cell data☆68Updated this week
- ☆49Oct 29, 2025Updated 10 months ago
- ☆28May 16, 2025Updated last year
- This package implements the Ensemble of Gene Set Enrichment Analyses (EGSEA) method for gene set testing.☆11Jan 21, 2024Updated 2 years ago