EperLuo / scDiffusionLinks
A model developed for the generation of scRNA-seq data
☆79Updated 9 months ago
Alternatives and similar repositories for scDiffusion
Users that are interested in scDiffusion are comparing it to the libraries listed below
Sorting:
- Repository for Nicheformer: a foundation model for single-cell and spatial omics☆127Updated last week
- Modeling complex perturbations with CellFlow☆99Updated last week
- Official repo for CellPLM: Pre-training of Cell Language Model Beyond Single Cells.☆99Updated last year
- Comprehensive suite for evaluating perturbation prediction models☆110Updated 3 weeks ago
- The Compositional Perturbation Autoencoder (CPA) is a deep generative framework to learn effects of perturbations at the single-cell leve…☆119Updated last year
- Code for evaluating single cell foundation models scBERT and scGPT☆46Updated last year
- Evaluation suite for transcriptomic perturbation effect prediction models. Includes support for single-cell foundation models.☆31Updated 4 months ago
- ☆62Updated 4 months ago
- scPerturb: A resource and a python/R tool for single-cell perturbation data☆154Updated 9 months ago
- UCE is a zero-shot foundation model for single-cell gene expression data☆228Updated 9 months ago
- Single-Cell (Perturbation) Model Library☆84Updated 3 months ago
- ☆83Updated 3 weeks ago
- PerturbNet is a deep generative model that can predict the distribution of cell states induced by chemical or genetic perturbation☆57Updated 4 months ago
- A unified approach for integrating spatial and single-cell transcriptomics data by leveraging deep generative models☆74Updated last year
- Repository for paper scMulan: a multitask generative pre-trained language model for single-cell analysis.☆60Updated last year
- ☆23Updated 3 months ago
- Learning Single-Cell Perturbation Responses using Neural Optimal Transport☆151Updated last year
- ☆87Updated last year
- ☆85Updated 3 months ago
- ☆75Updated last year
- Transformer for One-Stop Interpretable Cell-type Annotation☆146Updated last year
- PRnet is a flexible and scalable perturbation-conditioned generative model predicting transcriptional responses to unseen complex perturb…☆68Updated 11 months ago
- Code for "Predicting Cellular Responses to Novel Drug Perturbations at a Single-Cell Resolution", NeurIPS 2022.☆131Updated 9 months ago
- 🏃 The go-to single-cell Foundation Model☆123Updated this week
- Models and datasets for perturbational single-cell omics☆168Updated 3 years ago
- scDiff: A General Single-Cell Analysis Framework via Conditional Diffusion Generative Models☆32Updated last year
- ☆116Updated 9 months ago
- ☆145Updated last year
- ☆87Updated 3 months ago
- ☆86Updated 2 years ago