DANCE: a deep learning library and benchmark platform for single-cell analysis
☆388Oct 5, 2026Updated this week
Alternatives and similar repositories for dance
Users that are interested in dance are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆868Apr 20, 2025Updated last year
- A large scale atlas coming with Graph Neural Network solution for spatial cell type deconvolution☆44Sep 15, 2024Updated 2 years ago
- scDiff: A General Single-Cell Analysis Framework via Conditional Diffusion Generative Models☆34Aug 13, 2024Updated 2 years ago
- Single-Cell Multimodal Prediction via Transformer☆28Feb 7, 2024Updated 2 years ago
- Official repo for CellPLM: Pre-training of Cell Language Model Beyond Single Cells.☆107Mar 28, 2024Updated 2 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- ☆364Dec 13, 2023Updated 2 years ago
- ☆1,646Apr 29, 2026Updated 5 months ago
- Deep probabilistic analysis of single-cell and spatial omics data☆1,703Updated this week
- CAST package☆43Oct 26, 2024Updated last year
- Benchmarking analysis of data integration tools☆432Apr 27, 2026Updated 5 months ago
- ☆68Sep 13, 2024Updated 2 years ago
- scGNN (single cell graph neural networks) for single cell clustering and imputation using graph neural networks☆154Jul 25, 2024Updated 2 years ago
- Single-cell biological network inference using a heterogeneous graph transformer☆78Feb 24, 2025Updated last year
- ☆139Jun 10, 2022Updated 4 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- ☆89Jun 24, 2023Updated 3 years ago
- Graph-linked unified embedding for single-cell multi-omics data integration☆481Feb 9, 2026Updated 8 months ago
- ☆29Dec 15, 2021Updated 4 years ago
- ☆343Aug 16, 2026Updated last month
- Context specific and dynamic gene regulatory network reconstruction and analysis☆134Aug 3, 2026Updated 2 months ago
- Mosaic single cell data integration using non-overlapping features☆39Sep 20, 2022Updated 4 years ago
- SCENIC+ is a python package to build gene regulatory networks (GRNs) using combined or separate single-cell gene expression (scRNA-seq) a…☆266Jan 16, 2026Updated 8 months ago
- ☆590Oct 3, 2026Updated last week
- Pytorch implementation of scDeepCluster for Single Cell RNA-seq data☆33Jul 10, 2024Updated 2 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- An unsupervised scRNA-seq analysis workflow with graph attention networks☆25May 14, 2023Updated 3 years ago
- ☆68Jul 13, 2023Updated 3 years ago
- Models and datasets for perturbational single-cell omics☆185Aug 19, 2022Updated 4 years ago
- Python package to perform enrichment analysis from omics data.☆296Updated this week
- ☆22Apr 27, 2023Updated 3 years ago
- A tool for semi-automatic cell type classification☆510May 22, 2026Updated 4 months ago
- tools and notes for spatial omics☆370Feb 26, 2025Updated last year
- Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.☆3,870Updated this week
- Spatial-Linked Alignment Tool☆95Dec 20, 2024Updated last year
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- scPerturb: A resource and a python/R tool for single-cell perturbation data☆190Feb 25, 2025Updated last year
- CellRank: dynamics from multi-view single-cell data☆457Updated this week
- Adaptive Graph Attention Auto-encoder for Spatial Domain Identification of Spatial Transcriptomics☆88Mar 5, 2022Updated 4 years ago
- sEV-containing droplet identification in scRNA-seq data (SEVtras)☆27Feb 22, 2025Updated last year
- ☆55Sep 23, 2025Updated last year
- ☆324Mar 18, 2024Updated 2 years ago
- Spatiotemporal modeling of spatial transcriptomics☆344Feb 25, 2026Updated 7 months ago