Alternatives and similar repositories for dance

Users that are interested in dance are comparing it to the libraries listed below

• OmicsML / awesome-deep-learning-single-cell-papers
  ☆783Updated 2 months ago
• OmicsML / awesome-foundation-model-single-cell-papers
  ☆295Updated 2 months ago
• theislab / single-cell-transformer-papers
  ☆319Updated last month
• snap-stanford / GEARS
  GEARS is a geometric deep learning model that predicts outcomes of novel multi-gene perturbations
  ☆263Updated 4 months ago
• TencentAILabHealthcare / scBERT
  ☆317Updated last year
• biomap-research / scFoundation
  ☆339Updated 4 months ago
• snap-stanford / UCE
  UCE is a zero-shot foundation model for single-cell gene expression data
  ☆197Updated 4 months ago
• xianglin226 / Benchmarking-Single-Cell-Perturbation
  Single-Cell (Perturbation) Model Library
  ☆64Updated this week
• HelloWorldLTY / scEval
  Codes for paper: Evaluating the Utilities of Large Language Models in Single-cell Data Analysis.
  ☆70Updated last week
• yiqunchen / GenePT
  ☆266Updated last year
• OmicsML / CellPLM
  Official repo for CellPLM: Pre-training of Cell Language Model Beyond Single Cells.
  ☆86Updated last year
• theislab / scib
  Benchmarking analysis of data integration tools
  ☆363Updated 5 months ago
• gao-lab / GLUE
  Graph-linked unified embedding for single-cell multi-omics data integration
  ☆415Updated last week
• theislab / nicheformer
  Repository for Nicheformer: a foundation model for single-cell and spatial omics
  ☆94Updated 3 months ago
• jkobject / geneformer
  ☆69Updated last month
• JackieHanLab / TOSICA
  Transformer for One-Stop Interpretable Cell-type Annotation
  ☆142Updated last year
• PharMolix / LangCell
  Code for "LangCell: Language-Cell Pre-training for Cell Identity Understanding".
  ☆59Updated 5 months ago
• OmicsML / scMoFormer
  Single-Cell Multimodal Prediction via Transformer
  ☆28Updated last year
• openproblems-bio / openproblems
  Formalizing and benchmarking open problems in single-cell genomics
  ☆337Updated this week
• juexinwang / scGNN
  scGNN (single cell graph neural networks) for single cell clustering and imputation using graph neural networks
  ☆146Updated 11 months ago
• sanderlab / scPerturb
  scPerturb: A resource and a python/R tool for single-cell perturbation data
  ☆128Updated 4 months ago
• Genentech / scimilarity
  A unifying representation of single cell expression profiles that quantifies similarity between expression states and generalizes to repr…
  ☆197Updated last week
• xCompass-AI / GeneCompass
  GeneCompass
  ☆84Updated last week
• theislab / sc-pert
  Models and datasets for perturbational single-cell omics
  ☆152Updated 2 years ago
• clinicalml / sc-foundation-eval
  Code for evaluating single cell foundation models scBERT and scGPT
  ☆44Updated 10 months ago
• theislab / scarches
  Reference mapping for single-cell genomics
  ☆370Updated last month
• broadinstitute / Tangram
  Spatial alignment of single cell transcriptomic data.
  ☆305Updated this week
• scverse / pertpy
  Perturbation Analysis in the scverse ecosystem.
  ☆182Updated 2 weeks ago
• aristoteleo / dynamo-release
  Inclusive model of expression dynamics with conventional or metabolic labeling based scRNA-seq / multiomics, vector field reconstruction …
  ☆458Updated 2 weeks ago
• saezlab / liana-py
  LIANA+: an all-in-one framework for cell-cell communication
  ☆218Updated this week