OmicsML / danceLinks
DANCE: a deep learning library and benchmark platform for single-cell analysis
☆383Updated last week
Alternatives and similar repositories for dance
Users that are interested in dance are comparing it to the libraries listed below
Sorting:
- ☆364Updated last week
- ☆823Updated 7 months ago
- GEARS is a geometric deep learning model that predicts outcomes of novel multi-gene perturbations☆315Updated 10 months ago
- ☆336Updated 6 months ago
- Graph-linked unified embedding for single-cell multi-omics data integration☆438Updated 3 weeks ago
- Official repo for CellPLM: Pre-training of Cell Language Model Beyond Single Cells.☆99Updated last year
- Single-Cell Multimodal Prediction via Transformer☆28Updated last year
- ☆30Updated last year
- ☆339Updated last year
- UCE is a zero-shot foundation model for single-cell gene expression data☆228Updated 9 months ago
- Single-Cell (Perturbation) Model Library☆84Updated 3 months ago
- Code for "LangCell: Language-Cell Pre-training for Cell Identity Understanding".☆63Updated 11 months ago
- Repository for Nicheformer: a foundation model for single-cell and spatial omics☆127Updated last week
- ☆297Updated last year
- ☆372Updated last week
- ☆33Updated 2 months ago
- scGNN (single cell graph neural networks) for single cell clustering and imputation using graph neural networks☆153Updated last year
- Gene2Vec: Distributed Representation of Genes Based on Co-Expression☆125Updated 3 years ago
- Models and datasets for perturbational single-cell omics☆168Updated 3 years ago
- MOGONET (Multi-Omics Graph cOnvolutional NETworks) is a novel multi-omics data integrative analysis framework for classification tasks in…☆172Updated 4 years ago
- A collection of awesome bio-foundation models, including protein, RNA, DNA, gene, single-cell, and so on.☆274Updated 6 months ago
- Learning Single-Cell Perturbation Responses using Neural Optimal Transport☆151Updated last year
- Code for evaluating single cell foundation models scBERT and scGPT☆46Updated last year
- ☆139Updated last year
- Transformer for One-Stop Interpretable Cell-type Annotation☆146Updated last year
- A model developed for the generation of scRNA-seq data☆79Updated 9 months ago
- Single-cell spatial elucidation through image-augmented graph transformer☆34Updated 2 years ago
- ☆75Updated last year
- ☆49Updated last year
- [NeurIPS 2023] Official codes of "MuSe-GNN: Learning Unified Gene Representation From Multimodal Biological Graph Data"☆30Updated 5 months ago