KrishnaswamyLab / phemdLinks
Identifying cell subpopulational differences among single-cell biospecimens
☆13Updated 11 months ago
Alternatives and similar repositories for phemd
Users that are interested in phemd are comparing it to the libraries listed below
Sorting:
- SIB/Scilifelab autumn school in single cell omics 2019.☆22Updated 5 years ago
- ☆42Updated 4 years ago
- A R package for integrated scRNA-seq data analysis using the RPCI algorithm☆44Updated last year
- Methods for clustering and analyzing high-throughput single cell immune cell repertoires (RepSeq)☆15Updated 2 months ago
- Single-cell Case Control Analysis☆52Updated this week
- Mosaic single cell data integration using non-overlapping features☆37Updated 2 years ago
- R package for detection of cell-cell interaction using Non-negative Tensor Decomposition☆34Updated 2 months ago
- NATMI: Network Analysis Toolkit for the Multicellular Interactions☆35Updated 4 years ago
- R package for specialised analysis of single cell data☆38Updated 2 years ago
- R package for Bioconductor submission☆37Updated 2 years ago
- Covarying neighborhood analysis (CNA) is a method for finding structure in- and conducting association analysis with multi-sample single-…☆55Updated 3 months ago
- Flexible, probablistic metrics for quality control of scRNA-seq data☆21Updated 2 years ago
- Heterogeneity Induced Pre-Processing tOol☆18Updated 4 years ago
- psupertime is pseudotime ordering for single cell RNA-seq data with sequential labels☆42Updated 3 years ago
- Single-cell Mutual Information-based Network Engineering Ranger☆20Updated this week
- Identify genes with spatial expression trends in single-cell gene expression data☆50Updated 7 years ago
- ☆41Updated 4 years ago
- Analysis cell-type-specific functional gene network, with SCINET and HumanNetv3☆43Updated 2 weeks ago
- Normalize CITEseq Data☆66Updated 4 months ago
- ☆29Updated 2 years ago
- Workflow for the Association of T-cell receptors from 3' single-cell RNA-seq (WAT3R)☆21Updated 2 years ago
- Single-cell RNA-seq analysis from "Single cell transcriptomics reveals spatial and temporal dynamics of gene expression in the developing…☆23Updated 5 years ago
- COMET Single-Cell Marker Detection tool☆31Updated 3 years ago
- FastIntegrate integrates thousands of scRNA-seq datasets and outputs batch-corrected values for downstream analysis☆23Updated 10 months ago
- Cluster single cells and analyze cell clade relationships with colorful visualizations.☆45Updated 4 years ago
- Single-cell Orientation Tracing☆21Updated 3 years ago
- Gene regulatory network containing signed transcription factor-target gene interactions☆86Updated 3 months ago
- Snakefile-based process to turn 1.4 million ocular cells into a unified meta-atlas☆26Updated last year
- A manually curated database of literature-supported ligand-receptor interactions in human and mouse☆31Updated last year
- A rapid and robust plate-based single cell ATAC-seq (scATAC-seq) method☆43Updated 4 years ago