☆15Aug 5, 2022Updated 4 years ago
Alternatives and similar repositories for DeepVelo
Users that are interested in DeepVelo are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆13Aug 9, 2022Updated 4 years ago
- ☆17Jun 29, 2026Updated 2 months ago
- A Julia package for reconstructing the vector field components; potential, divergence, curl and Jacobian matrix in a data manifold (appro…☆20Jun 23, 2026Updated 2 months ago
- Single-cell Graph Cuts Optimization☆16Apr 27, 2024Updated 2 years ago
- PHOENIX: a tool to infer biologically informed NeuralODEs describing genome-wide regulatory dynamics☆22May 8, 2024Updated 2 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- An R implementation of the Gene Frequency - Inverse Cell Frequency method for single cell data normalization☆20Aug 29, 2023Updated 3 years ago
- Variant impact phenotyping using Perturb-seq☆10Apr 22, 2024Updated 2 years ago
- ☆11May 6, 2021Updated 5 years ago
- Predict RNA velocity through deep learning☆72Dec 12, 2023Updated 2 years ago
- Creating multi-resolution embeddings and clusters from high dimensional data☆58Sep 27, 2024Updated last year
- A Toolkit for Single Cell Spatiotemporal Dynamical Generative Modeling☆18Jun 30, 2026Updated 2 months ago
- Dynamic inference from single-cell snapshots by optimal transport☆21Mar 14, 2024Updated 2 years ago
- ☆11Apr 1, 2024Updated 2 years ago
- 2D Vector-Quantized Auto-Encoder for compression of Whole-Slide Images in Histopathology☆16Jul 18, 2024Updated 2 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- DeepRUOTv2 (Dynamical Optimal Transport Tools)☆23Dec 10, 2025Updated 8 months ago
- Full annotation using shape-constrained trees☆31Sep 15, 2023Updated 2 years ago
- pipeline for demultiplex and align both ATAC and RNA data generated in SHARE-seq☆16Jun 20, 2022Updated 4 years ago
- Variational Estimation of Latent Velocity from Expression with Time-resolution☆13May 30, 2024Updated 2 years ago
- Ressources for Boinformatics Trainings☆15Nov 20, 2023Updated 2 years ago
- ☆14May 7, 2025Updated last year
- Deciphering driver regulators of cell fate decisions from single-cell RNA-seq data☆31Oct 24, 2024Updated last year
- A method for calculating single cell entropy and reconstructing cell differentiation lineage using single-cell RNA-seq data☆10May 26, 2023Updated 3 years ago
- Code and Data Availability for Single cell transcriptomics reveals a signaling roadmap coordinating endoderm and mesoderm lineage diversi…☆10Apr 16, 2020Updated 6 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Supervised Vector-Quantized Autoencoder☆20Jul 6, 2021Updated 5 years ago
- Python Toolkit for Transcription Factor Activity Inference and Clustering of scRNA-seq Data☆36Dec 15, 2025Updated 8 months ago
- High-Dimensional Gene Expression and Morphology Profiles of Cells across 28,000 Genetic and Chemical Perturbations☆55Aug 11, 2025Updated last year
- A Python wrapper around Clustal Omega (http://www.clustal.org/omega/)☆27Jan 2, 2022Updated 4 years ago
- Hierarchical annotation of immune cells n scRNA-Seq data based on ssGSEA algorithm.☆12May 31, 2024Updated 2 years ago
- ☆13Dec 16, 2021Updated 4 years ago
- Graph-based Decoding for In Situ Sequencing☆10Jul 2, 2020Updated 6 years ago
- An r interface to perform ROMA☆10Aug 24, 2018Updated 8 years ago
- ☆43Apr 5, 2021Updated 5 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A python package for calculating local cell specific networks☆18Nov 17, 2023Updated 2 years ago
- ☆20May 12, 2026Updated 3 months ago
- LivecellX is a comprehensive single-cell oriented deep learning live-cell analysis framework written in Python, designed specifically for…☆16Dec 10, 2025Updated 8 months ago
- Examples of BrainPy☆41Jun 19, 2026Updated 2 months ago
- SPROD: Spatial expression profiling de-noising☆36Jun 14, 2023Updated 3 years ago
- Automated marker-based annotation of cell types☆14Aug 8, 2022Updated 4 years ago
- CeSpGRN: Inferring cell specific GRN using single-cell gene expression data☆22Mar 23, 2026Updated 5 months ago