Deep joint-leaning single-cell multi-omics model
☆16Jun 27, 2022Updated 4 years ago
Alternatives and similar repositories for scMVAE
Users that are interested in scMVAE are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆20Sep 13, 2022Updated 4 years ago
- ☆36Oct 15, 2026Updated 2 weeks ago
- ☆18Jun 6, 2022Updated 4 years ago
- ☆19Jul 31, 2021Updated 5 years ago
- scGMAI: a Gaussian mixture model for clustering single-cell RNA-seq data based on deep autoencoder☆15Jun 7, 2021Updated 5 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- .h5mu files interface for Seurat☆35Nov 28, 2023Updated 2 years ago
- Deep learning model for single-cell inference of multi-omic profiles from a single input modality.☆53Jul 17, 2023Updated 3 years ago
- scDCC: Single Cell Deep Constrained Clustering☆45Jul 10, 2024Updated 2 years ago
- Simultaneous deep generative modeling and clustering of single cell genomic data☆33Nov 14, 2022Updated 3 years ago
- The main repository for ACTIVA: realistic single-cell RNA-seq generation with automatic cell-type identification using introspective vari…☆10Jan 23, 2023Updated 3 years ago
- Novel joint clustering method with scRNA-seq and CITE-seq data☆11Jun 22, 2021Updated 5 years ago
- ☆67Nov 14, 2023Updated 2 years ago
- single cell foundation model for Gene network inference and more☆20May 20, 2026Updated 5 months ago
- A python package for calculating local cell specific networks☆18Nov 17, 2023Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- An unsupervised approach for the integrative analysis of single-cell multi-omics data☆33Nov 16, 2020Updated 5 years ago
- Code for the paper: "Abide by the Law and Follow the Flow: Conservation Laws for Gradient Flows".☆12Feb 24, 2024Updated 2 years ago
- ☆59Nov 21, 2020Updated 5 years ago
- Code for Nature Scientific Reports 2020 paper: "Unsupervised generative and graph neural methods for modelling cell differentiation" by I…☆18Jul 23, 2020Updated 6 years ago
- ☆38Aug 18, 2022Updated 4 years ago
- scDiff: A General Single-Cell Analysis Framework via Conditional Diffusion Generative Models☆34Aug 13, 2024Updated 2 years ago
- PlaNet: Predicting population response to drugs via clinical knowledge graph☆32Mar 13, 2025Updated last year
- Single-cell biological network inference using a heterogeneous graph transformer☆78Feb 24, 2025Updated last year
- Papers, codes, datasets, researchers on information bottleneck☆64Aug 6, 2024Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- "Topological Identification and Interpretation for Single-cell Gene Regulation Elucidation across Multiple Platforms using scMGCA" in Nat…☆19Feb 5, 2023Updated 3 years ago
- ☆19Apr 3, 2026Updated 6 months ago
- Gaussian process regression package for counts data with negative binomial and zero-inflated negative binomial likelihoods☆25Feb 24, 2025Updated last year
- ☆29Dec 15, 2021Updated 4 years ago
- All the submission scripts used for my work on Jean Zay and the TGCC☆15Jul 17, 2023Updated 3 years ago
- A neural network framework for predicting the Hi-C chromatin interactions from megabase scale DNA sequence☆10May 15, 2024Updated 2 years ago
- Empirical Bayes Deconvolution☆11Aug 23, 2026Updated 2 months ago
- UNet script, model, sample data☆14Feb 19, 2025Updated last year
- Imputing Single-cell RNA-seq data by combining Graph Convolution and Autoencoder Neural Networks☆20Jun 21, 2024Updated 2 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆11Aug 29, 2022Updated 4 years ago
- Multi-omics integration method using AE and GCN☆42Jul 2, 2026Updated 3 months ago
- CDSeq MATLAB code. CDSeq is a novel computational complete deconvolution method for dissecting tissue heterogeneity.☆11Oct 10, 2020Updated 6 years ago
- Deep learning for single-cell transcript counts☆91Mar 14, 2025Updated last year
- ☆13Jul 21, 2021Updated 5 years ago
- Neural network from scratch in Python using Numpy☆12May 28, 2017Updated 9 years ago
- Data-driven design of context-specific regulatory elements☆10Jun 18, 2024Updated 2 years ago