cmzuo11 / scMVAE
Deep joint-leaning single-cell multi-omics model
☆16Updated 2 years ago
Related projects ⓘ
Alternatives and complementary repositories for scMVAE
- ☆16Updated 3 years ago
- a unified single-cell data integration framework by optimal transport☆31Updated last month
- ☆91Updated 8 months ago
- Identify spatial domain☆59Updated last year
- Adaptive Graph Attention Auto-encoder for Spatial Domain Identification of Spatial Transcriptomics☆38Updated last year
- Cell clustering for spatial transcriptomics data with graph neural network☆58Updated last year
- Adaptive Graph Attention Auto-encoder for Spatial Domain Identification of Spatial Transcriptomics☆63Updated 2 years ago
- Adversarial domain translation networks for integrating large-scale atlas-level single-cell datasets☆31Updated last year
- Enhancing spatial transcriptomics data by predicting the expression of unmeasured genes from a dissociated scRNA-seq data☆28Updated 4 months ago
- Pytorch implementation of scDeepCluster for Single Cell RNA-seq data☆30Updated 4 months ago
- A Deep Learning-Based Model for the integration, cross-dataset cross-modality generation, self augmentation and matched multi-omics simul…☆13Updated last week
- overview of spatial datasets☆69Updated 9 months ago
- scNODE: Generative Model for Temporal Single Cell Transcriptomic Data Prediction☆17Updated last month
- Single-cell biological network inference using a heterogeneous graph transformer☆67Updated last year
- ☆16Updated 3 months ago
- ☆45Updated 2 weeks ago
- ☆25Updated 5 months ago
- Additional code and analysis from the single-cell integration benchmarking project☆55Updated last year
- A unified approach for integrating spatial and single-cell transcriptomics data by leveraging deep generative models☆53Updated 5 months ago
- Adaptive Graph Attention Auto-encoder for Spatial Domain Identification of Spatial Transcriptomics (STAGATE software based on pyG framewo…☆46Updated last year
- domain adaptation of spatial and single-cell transcriptome☆24Updated 2 months ago
- Single cell joint embedding and modality prediction with autoencoder☆9Updated 2 years ago
- ☆28Updated last year
- ☆44Updated last year
- ☆15Updated last month
- STAligner is a tool for alignment and integration of spatially resolved transcriptomics data.☆29Updated 7 months ago
- Deep learning model for single-cell inference of multi-omic profiles from a single input modality.☆39Updated last year
- ☆21Updated 5 months ago
- Deconvoluting Spatial Transcriptomics Data through Graph-based Artificial Intelligence☆34Updated 2 years ago
- scGMAI: a Gaussian mixture model for clustering single-cell RNA-seq data based on deep autoencoder☆15Updated 3 years ago