cmzuo11 / scMVAE
Deep joint-leaning single-cell multi-omics model
☆16Updated 2 years ago
Alternatives and similar repositories for scMVAE:
Users that are interested in scMVAE are comparing it to the libraries listed below
- ☆17Updated 3 years ago
- a unified single-cell data integration framework by optimal transport☆35Updated 6 months ago
- scNODE: Generative Model for Temporal Single Cell Transcriptomic Data Prediction☆19Updated 6 months ago
- Cell clustering for spatial transcriptomics data with graph neural network☆61Updated 2 years ago
- Pytorch implementation of scDeepCluster for Single Cell RNA-seq data☆32Updated 9 months ago
- Identify spatial domain☆70Updated last year
- Enhancing spatial transcriptomics data by predicting the expression of unmeasured genes from a dissociated scRNA-seq data☆34Updated 9 months ago
- ☆112Updated last year
- ☆15Updated 2 years ago
- overview of spatial datasets☆74Updated last year
- Adaptive Graph Attention Auto-encoder for Spatial Domain Identification of Spatial Transcriptomics☆45Updated last year
- Adaptive Graph Attention Auto-encoder for Spatial Domain Identification of Spatial Transcriptomics☆71Updated 3 years ago
- ☆33Updated 10 months ago
- scGMAI: a Gaussian mixture model for clustering single-cell RNA-seq data based on deep autoencoder☆16Updated 3 years ago
- Single-cell biological network inference using a heterogeneous graph transformer☆72Updated last month
- Deconvoluting Spatial Transcriptomics Data through Graph-based Artificial Intelligence☆38Updated 2 years ago
- The software of Pamona, a partial manifold alignment algorithm.☆19Updated 4 years ago
- Adversarial domain translation networks for integrating large-scale atlas-level single-cell datasets☆30Updated last year
- Additional code and analysis from the single-cell integration benchmarking project☆60Updated 2 years ago
- ☆29Updated 2 years ago
- A unified approach for integrating spatial and single-cell transcriptomics data by leveraging deep generative models☆63Updated 10 months ago
- scDCC: Single Cell Deep Constrained Clustering☆40Updated 9 months ago
- STAligner is a tool for alignment and integration of spatially resolved transcriptomics data.☆37Updated last year
- ☆10Updated 3 months ago
- Adaptive Graph Attention Auto-encoder for Spatial Domain Identification of Spatial Transcriptomics (STAGATE software based on pyG framewo…☆56Updated last year
- ☆45Updated 2 years ago
- An offical repo for paper "Single-cells are Spatial Tokens: Transformers for Spatially Resolved Transcriptomics Data Imputation"☆17Updated last year
- domain adaptation of spatial and single-cell transcriptome☆26Updated 6 months ago
- ☆20Updated 7 months ago
- ☆54Updated 5 months ago