cmzuo11 / scMVAELinks
Deep joint-leaning single-cell multi-omics model
☆16Updated 2 years ago
Alternatives and similar repositories for scMVAE
Users that are interested in scMVAE are comparing it to the libraries listed below
Sorting:
- ☆17Updated 3 years ago
- a unified single-cell data integration framework by optimal transport☆35Updated 8 months ago
- CLEAR: Self-supervised contrastive learning for integrative single-cell RNA-seq data analysis☆33Updated 2 years ago
- scGMAI: a Gaussian mixture model for clustering single-cell RNA-seq data based on deep autoencoder☆16Updated 4 years ago
- Single-cell biological network inference using a heterogeneous graph transformer☆73Updated 3 months ago
- Deconvoluting Spatial Transcriptomics Data through Graph-based Artificial Intelligence☆39Updated 2 years ago
- ☆16Updated 3 years ago
- Adversarial domain translation networks for integrating large-scale atlas-level single-cell datasets☆30Updated last year
- Enhancing spatial transcriptomics data by predicting the expression of unmeasured genes from a dissociated scRNA-seq data☆36Updated 11 months ago
- Deep learning model for single-cell inference of multi-omic profiles from a single input modality.☆42Updated last year
- overview of spatial datasets☆75Updated last year
- Cell clustering for spatial transcriptomics data with graph neural network☆62Updated 2 years ago
- ☆29Updated 2 years ago
- Pytorch implementation of scDeepCluster for Single Cell RNA-seq data☆32Updated 11 months ago
- Single-cell epigenomic data annotation via supervised non-linear embedding☆24Updated 3 years ago
- Single cell joint embedding and modality prediction with autoencoder☆9Updated 2 years ago
- Adaptive Graph Attention Auto-encoder for Spatial Domain Identification of Spatial Transcriptomics☆46Updated 2 years ago
- A unified approach for integrating spatial and single-cell transcriptomics data by leveraging deep generative models☆67Updated last year
- ☆14Updated 4 years ago
- ☆45Updated 2 years ago
- Iterative transfer learning with neural network improves clustering and cell type classification in single-cell RNA-seq analysis☆54Updated 2 weeks ago
- scNODE: Generative Model for Temporal Single Cell Transcriptomic Data Prediction☆21Updated 8 months ago
- ☆21Updated last year
- Multi-omics data analysis for rare population inference using single-cell graph transformer☆19Updated 7 months ago
- ☆120Updated last year
- Additional code and analysis from the single-cell integration benchmarking project☆67Updated 2 years ago
- Identify spatial domain☆75Updated 3 weeks ago
- ☆21Updated 10 months ago
- Adaptive Graph Attention Auto-encoder for Spatial Domain Identification of Spatial Transcriptomics☆73Updated 3 years ago
- ☆59Updated last year