Alternatives and similar repositories for STAMP

Users that are interested in STAMP are comparing it to the libraries listed below

• czi-ai / scGenePT
  ☆24Updated 9 months ago
• altoslabs / perturbench
  ☆43Updated 2 weeks ago
• OSU-BMBL / scDEAL
  Deep Transfer Learning of Drug Sensitivity by Integrating Bulk and Single-cell RNA-seq data
  ☆57Updated last year
• jiang-q19 / scPRAM
  scPRAM accurately predicts single-cell gene expression perturbation response based on attention mechanism
  ☆15Updated last year
• mcgilldinglab / CellAgentChat
  Python agent-based model tool for inference, visualization and analysis of cell-cell communication from single-cell data
  ☆33Updated this week
• welch-lab / PerturbNet
  PerturbNet is a deep generative model that can predict the distribution of cell states induced by chemical or genetic perturbation
  ☆49Updated 3 months ago
• mcgilldinglab / UNAGI
  Unagi: Deep Generative Model for Deciphering Cellular Dynamics and In-Silico Drug Discovery in Complex Diseases.
  ☆40Updated last week
• cole-trapnell-lab / sci-plex
  repository containing analysis scripts and auxiliary files
  ☆36Updated 5 years ago
• biomed-AI / CellFM
  ☆84Updated 2 months ago
• madilabcode / scNET
  ☆54Updated last month
• SuperBianC / scMulan
  Repository for paper scMulan: a multitask generative pre-trained language model for single-cell analysis.
  ☆59Updated last year
• theislab / scTab
  ☆61Updated last year
• QuKunLab / MultiomeBenchmarking
  ☆50Updated 7 months ago
• lanagarmire / Asgard
  ☆44Updated last year
• TuftsBCB / RegDiffusion
  Diffusion model for gene regulatory network inference.
  ☆24Updated 3 months ago
• Roy-lab / scMTNI
  ☆30Updated 3 months ago
• SmritiChawla / Precily
  ☆31Updated 3 years ago
• SchubertLab / mvTCR
  ☆54Updated 11 months ago
• ZJUFanLab / scSpace
  an integrative algorithm to distinguish spatially variable cell subclusters by reconstructing cells onto a pseudo space with spatial tran…
  ☆23Updated 2 years ago
• yjgeno / GenKI
  ☆18Updated last year
• melobio / Concerto-reproducibility
  ☆40Updated 2 years ago
• TencentAILabHealthcare / scPROTEIN
  ☆54Updated 10 months ago
• siyuh / Squidiff
  ☆14Updated 7 months ago
• const-ae / linear_perturbation_prediction-Paper
  ☆56Updated 3 months ago
• sjgosai / boda2
  Computational Optimization of DNA Activity (CODA)
  ☆64Updated 6 months ago
• theislab / multicpa
  ☆15Updated 3 years ago
• scverse / muon-tutorials
  Tutorials for multimodal omics data analysis
  ☆17Updated 8 months ago
• decomverse / ACTIONet
  ACTIONet single-cell analysis framework
  ☆42Updated last year
• ailabstw / scDrug
  scDrug: From scRNA-seq to Drug Repositioning
  ☆36Updated 2 years ago
• tianshilu / pMTnet
  Deep Learning the T Cell Receptor Binding Specificity of Neoantigen
  ☆86Updated 3 years ago